WormBase Tree Display for Gene: WBGene00013858
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WBGene00013858 | SMap | S_parent | Sequence | ZC168 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ssp | ||||||
Allele | WBVar01500079 | ||||||
WBVar01498996 | |||||||
WBVar01857343 | |||||||
WBVar01499372 | |||||||
WBVar01499925 | |||||||
WBVar00434619 | |||||||
WBVar02121996 | |||||||
WBVar02121997 | |||||||
WBVar00602789 | |||||||
WBVar00939391 | |||||||
WBVar00939392 | |||||||
WBVar00939393 | |||||||
WBVar01500245 | |||||||
WBVar01839046 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (37) | |||||||
Paralog (33) | |||||||
Structured_description | Automated_description | Enriched in ABalaapppa; ABalapaapa; GABAergic neurons; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and age-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZC168.6 | |||||
Corresponding_transcript | ZC168.6.1 | ||||||
Other_sequence (17) | |||||||
Associated_feature | WBsf997689 | ||||||
WBsf997690 | |||||||
WBsf1018132 | |||||||
WBsf230769 | |||||||
Experimental_info | RNAi_result | WBRNAi00058760 | Inferred_automatically | RNAi_primary | |||
WBRNAi00103630 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021587 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037966 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1015211 | ||||||
Expr1036198 | |||||||
Expr1162179 | |||||||
Expr2016936 | |||||||
Expr2035084 | |||||||
Drives_construct | WBCnstr00029496 | ||||||
Construct_product | WBCnstr00029496 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (198) | |||||||
Interaction (281) | |||||||
Map_info | Map | IV | Position | 4.69028 | Error | 0.001664 | |
Positive | Positive_clone | ZC168 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |