WormBase Tree Display for Gene: WBGene00012144
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WBGene00012144 | SMap | S_parent | Sequence | CHROMOSOME_V | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | lgmn-1 | Person_evidence | WBPerson56 | |||
Author_evidence | H. Kadota | ||||||
Sequence_name | T28H10.3 | ||||||
Molecular_name | T28H10.3 | ||||||
T28H10.3.1 | |||||||
CE14367 | |||||||
Other_name | CELE_T28H10.3 | Accession_evidence | NDB | BX284605 | |||
Public_name | lgmn-1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lgmn | ||||||
Allele | WBVar00009180 | ||||||
WBVar01499547 | |||||||
WBVar01055456 | |||||||
WBVar01055457 | |||||||
WBVar01055458 | |||||||
WBVar01055459 | |||||||
WBVar01055460 | |||||||
WBVar01055461 | |||||||
WBVar01055462 | |||||||
WBVar01055463 | |||||||
WBVar01055464 | |||||||
WBVar01055465 | |||||||
WBVar01055466 | |||||||
WBVar00251584 | |||||||
WBVar01055467 | |||||||
WBVar01055468 | |||||||
WBVar01055469 | |||||||
WBVar01055470 | |||||||
WBVar01055471 | |||||||
WBVar01055472 | |||||||
WBVar01499013 | |||||||
WBVar01055473 | |||||||
WBVar01055474 | |||||||
WBVar01055475 | |||||||
WBVar01868080 | |||||||
WBVar01500212 | |||||||
WBVar00472964 | |||||||
WBVar01500213 | |||||||
WBVar00472965 | |||||||
WBVar00472966 | |||||||
WBVar00472967 | |||||||
WBVar00472968 | |||||||
WBVar00472969 | |||||||
WBVar00472970 | |||||||
WBVar01499299 | |||||||
WBVar00472971 | |||||||
WBVar02124251 | |||||||
WBVar01499316 | |||||||
WBVar01462158 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00011482 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Involved in PERK-mediated unfolded protein response. Predicted to be located in vacuole. Is an ortholog of human LGMN (legumain). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T28H10.3 | |||||
Corresponding_transcript | T28H10.3.1 | ||||||
Other_sequence (139) | |||||||
Associated_feature | WBsf647381 | ||||||
WBsf661908 | |||||||
WBsf232663 | |||||||
Experimental_info | RNAi_result | WBRNAi00076725 | Inferred_automatically | RNAi_primary | |||
WBRNAi00054448 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089172 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001579 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036107 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019417 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr10444 | ||||||
Expr10445 | |||||||
Expr1010916 | |||||||
Expr1035372 | |||||||
Expr1157992 | |||||||
Expr2006638 | |||||||
Expr2024855 | |||||||
Drives_construct | WBCnstr00015333 | ||||||
WBCnstr00030108 | |||||||
Construct_product | WBCnstr00022837 | ||||||
WBCnstr00030108 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (345) | |||||||
Interaction (162) | |||||||
Map_info | Map | V | Position | 4.43767 | |||
Positive | Positive_clone | T28H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00059755 | |||||||
WBPaper00062690 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |