WormBase Tree Display for Gene: WBGene00011503
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WBGene00011503 | SMap | S_parent | Sequence | T05G5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gcc-2 | Paper_evidence | WBPaper00046586 | |||||
Person_evidence | WBPerson298 | ||||||||
Sequence_name | T05G5.9 | ||||||||
Molecular_name | T05G5.9a | ||||||||
T05G5.9a.1 | |||||||||
CE34088 | |||||||||
T05G5.9b | |||||||||
CE34089 | |||||||||
T05G5.9b.1 | |||||||||
Other_name | CELE_T05G5.9 | Accession_evidence | NDB | BX284603 | |||||
Public_name | gcc-2 | ||||||||
DB_info | Database | AceView | gene | 3K848 | |||||
WormQTL | gene | WBGene00011503 | |||||||
WormFlux | gene | WBGene00011503 | |||||||
NDB | locus_tag | CELE_T05G5.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011503|UniProtKB=P34562 | |||||||
family | PTHR23157 | ||||||||
NCBI | gene | 176378 | |||||||
RefSeq | protein | NM_001027578.5 | |||||||
NM_001027577.4 | |||||||||
SwissProt | UniProtAcc | P34562 | |||||||
TREEFAM | TREEFAM_ID | TF320667 | |||||||
UniProt_GCRP | UniProtAcc | P34562 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 Mar 2015 16:36:59 | WBPerson2970 | Name_change | CGC_name | gcc-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gcc | ||||||||
Allele | WBVar01492342 | ||||||||
WBVar01500260 | |||||||||
WBVar00852336 | |||||||||
WBVar00250450 | |||||||||
WBVar00852337 | |||||||||
WBVar00852338 | |||||||||
WBVar00852339 | |||||||||
WBVar00852340 | |||||||||
WBVar00852341 | |||||||||
WBVar00852342 | |||||||||
WBVar00852343 | |||||||||
WBVar00852344 | |||||||||
WBVar00852345 | |||||||||
WBVar00852346 | |||||||||
WBVar00852347 | |||||||||
WBVar00852348 | |||||||||
WBVar00852349 | |||||||||
WBVar00852350 | |||||||||
WBVar00852351 | |||||||||
WBVar00094760 | |||||||||
WBVar00852352 | |||||||||
WBVar00852353 | |||||||||
WBVar00852354 | |||||||||
WBVar00852355 | |||||||||
WBVar00852356 | |||||||||
WBVar00852357 | |||||||||
WBVar00852358 | |||||||||
WBVar00852359 | |||||||||
WBVar00852360 | |||||||||
WBVar00852361 | |||||||||
WBVar00852362 | |||||||||
WBVar00852363 | |||||||||
WBVar00852364 | |||||||||
WBVar01567195 | |||||||||
WBVar01499774 | |||||||||
WBVar00178132 | |||||||||
WBVar00178133 | |||||||||
WBVar01952529 | |||||||||
WBVar00178134 | |||||||||
WBVar01990381 | |||||||||
WBVar00564720 | |||||||||
WBVar00405980 | |||||||||
WBVar00405981 | |||||||||
WBVar00405982 | |||||||||
WBVar00405983 | |||||||||
WBVar00405984 | |||||||||
WBVar00215613 | |||||||||
WBVar00215614 | |||||||||
WBVar00215615 | |||||||||
WBVar01447664 | |||||||||
WBVar01723267 | |||||||||
WBVar01578942 | |||||||||
WBVar00100940 | |||||||||
WBVar00100941 | |||||||||
Strain | WBStrain00008484 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043232 | ||||||||
Contained_in_operon | CEOP3616 | ||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00002220 | Caenorhabditis elegans | From_analysis | Panther | |||||
Structured_description | Automated_description | Predicted to be located in Golgi apparatus. Is an ortholog of human GCC2 (GRIP and coiled-coil domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05G5.9a | |||||||
T05G5.9b | |||||||||
Corresponding_CDS_history | T05G5.9:wp100 | ||||||||
T05G5.9:wp101 | |||||||||
Corresponding_transcript | T05G5.9a.1 | ||||||||
T05G5.9b.1 | |||||||||
Other_sequence | CBC10174_1 | ||||||||
CBC01309_1 | |||||||||
CBC07543_1 | |||||||||
Associated_feature | WBsf651403 | ||||||||
WBsf667327 | |||||||||
WBsf978986 | |||||||||
WBsf993792 | |||||||||
WBsf993793 | |||||||||
WBsf227365 | |||||||||
WBsf227366 | |||||||||
Experimental_info | RNAi_result | WBRNAi00018250 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006084 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018249 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052571 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00030605 | ||||||||
Construct_product | WBCnstr00030605 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (106) | |||||||||
Interaction | WBInteraction000218608 | ||||||||
WBInteraction000383674 | |||||||||
WBInteraction000420116 | |||||||||
WBInteraction000433175 | |||||||||
WBInteraction000465875 | |||||||||
WBInteraction000543833 | |||||||||
WBInteraction000544022 | |||||||||
WBInteraction000576296 | |||||||||
Map_info | Map | III | Position | 0.992631 | |||||
Positive | Positive_clone | T05G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038455 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00046586 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |