WormBase Tree Display for Gene: WBGene00011292
expand all nodes | collapse all nodes | view schema
| WBGene00011292 | SMap | S_parent | Sequence | R102 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | allo-1 | |||||||
| Sequence_name | R102.5 | ||||||||
| Molecular_name | R102.5a | ||||||||
| R102.5a.1 | |||||||||
| CE35601 | |||||||||
| R102.5b | |||||||||
| CE35602 | |||||||||
| R102.5b.1 | |||||||||
| Other_name | CELE_R102.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | allo-1 | ||||||||
| DB_info | Database | AceView | gene | 4L460 | |||||
| WormQTL | gene | WBGene00011292 | |||||||
| WormFlux | gene | WBGene00011292 | |||||||
| NDB | locus_tag | CELE_R102.5 | |||||||
| NCBI | gene | 177962 | |||||||
| RefSeq | protein | NM_069580.7 | |||||||
| NM_069579.6 | |||||||||
| SwissProt | UniProtAcc | Q9U389 | |||||||
| TREEFAM | TREEFAM_ID | TF321834 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U389 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2018 11:02:49 | WBPerson1983 | Name_change | CGC_name | allo-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | allo | ||||||||
| Allele | WBVar00270744 | ||||||||
| WBVar01795392 | |||||||||
| WBVar01500079 | |||||||||
| WBVar00296358 | |||||||||
| WBVar01498996 | |||||||||
| WBVar02151090 | |||||||||
| WBVar01499372 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00939140 | |||||||||
| WBVar00939141 | |||||||||
| WBVar00939142 | |||||||||
| WBVar00939143 | |||||||||
| WBVar00939144 | |||||||||
| WBVar00939145 | |||||||||
| WBVar00939146 | |||||||||
| WBVar00939147 | |||||||||
| WBVar00939148 | |||||||||
| WBVar02151887 | |||||||||
| WBVar00939149 | |||||||||
| WBVar00939150 | |||||||||
| WBVar00939151 | |||||||||
| WBVar00939152 | |||||||||
| WBVar00939153 | |||||||||
| WBVar01857271 | |||||||||
| WBVar01730860 | |||||||||
| WBVar01730861 | |||||||||
| WBVar01730862 | |||||||||
| WBVar00233745 | |||||||||
| WBVar01500245 | |||||||||
| WBVar01398346 | |||||||||
| WBVar00434544 | |||||||||
| WBVar00434545 | |||||||||
| WBVar00434546 | |||||||||
| WBVar00434547 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP4392 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enables protein homodimerization activity. Involved in autophagosome assembly and regulation of autophagy. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R102.5a | |||||||
| R102.5b | |||||||||
| Corresponding_CDS_history | R102.5a:wp109 | ||||||||
| R102.5b:wp109 | |||||||||
| Corresponding_transcript | R102.5a.1 | ||||||||
| R102.5b.1 | |||||||||
| Other_sequence | CRC07284_1 | ||||||||
| CJC06633_1 | |||||||||
| CBC00833_1 | |||||||||
| CR09968 | |||||||||
| CJC03232_1 | |||||||||
| CJC01093_1 | |||||||||
| Associated_feature | WBsf652151 | ||||||||
| WBsf652152 | |||||||||
| WBsf981815 | |||||||||
| WBsf997677 | |||||||||
| WBsf1018127 | |||||||||
| WBsf230766 | |||||||||
| WBsf230767 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00113648 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051660 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061639 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109801 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061865 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017677 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109707 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034800 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109660 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9432 | ||||||||
| Expr14451 | |||||||||
| Expr1028712 | |||||||||
| Expr1034964 | |||||||||
| Expr1155333 | |||||||||
| Expr2005535 | |||||||||
| Expr2023754 | |||||||||
| Drives_construct | WBCnstr00030770 | ||||||||
| WBCnstr00039382 | |||||||||
| Construct_product | WBCnstr00013997 | ||||||||
| WBCnstr00030770 | |||||||||
| WBCnstr00039382 | |||||||||
| Antibody | WBAntibody00002801 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction (38) | |||||||||
| Map_info (3) | |||||||||
| Reference | WBPaper00030887 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00053507 | |||||||||
| WBPaper00064006 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
