WormBase Tree Display for Gene: WBGene00010774
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| WBGene00010774 | SMap | S_parent | Sequence | K11E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name (5) | |||||||||
| DB_info | Database | AceView | gene | XO337 | |||||
| WormQTL | gene | WBGene00010774 | |||||||
| WormFlux | gene | WBGene00010774 | |||||||
| NDB | locus_tag | CELE_K11E4.2 | |||||||
| NCBI | gene | 187296 | |||||||
| RefSeq | protein | NM_077894.7 | |||||||
| NM_001420579.1 | |||||||||
| TrEMBL | UniProtAcc | Q21429 | |||||||
| A0A9J5HVD6 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21429 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Oct 2022 14:55:54 | WBPerson21950 | Name_change | CGC_name | shc-3 | ||||
| Other_name | K11E4.2 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | shc | ||||||||
| Allele | WBVar02151976 | ||||||||
| WBVar01499887 | |||||||||
| WBVar01499519 | |||||||||
| WBVar01499888 | |||||||||
| WBVar01499710 | |||||||||
| WBVar01488861 | |||||||||
| WBVar02146365 | |||||||||
| WBVar02146366 | |||||||||
| WBVar01826011 | |||||||||
| WBVar01826012 | |||||||||
| WBVar01203434 | |||||||||
| WBVar01203435 | |||||||||
| WBVar01203436 | |||||||||
| WBVar01203437 | |||||||||
| WBVar01203438 | |||||||||
| WBVar02156745 | |||||||||
| WBVar01203439 | |||||||||
| WBVar01203440 | |||||||||
| WBVar01203441 | |||||||||
| WBVar01203442 | |||||||||
| WBVar01203443 | |||||||||
| WBVar01203444 | |||||||||
| WBVar01894657 | |||||||||
| WBVar00522590 | |||||||||
| WBVar00522591 | |||||||||
| WBVar02144917 | |||||||||
| WBVar01760011 | |||||||||
| WBVar01901721 | |||||||||
| WBVar01901722 | |||||||||
| WBVar01901723 | |||||||||
| WBVar01901724 | |||||||||
| WBVar01472172 | |||||||||
| WBVar02151374 | |||||||||
| WBVar01822613 | |||||||||
| WBVar01822614 | |||||||||
| WBVar01946171 | |||||||||
| WBVar01822615 | |||||||||
| WBVar02027591 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in ABplapaaap; ABprapaaap; URX; dopaminergic neurons; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; elt-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including stavudine; Zidovudine; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SH2 domain superfamily and SH2 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K11E4.2a | |||||||
| K11E4.2b | |||||||||
| Corresponding_CDS_history | K11E4.2:wp101 | ||||||||
| Corresponding_transcript | K11E4.2a.1 | ||||||||
| K11E4.2b.1 | |||||||||
| Associated_feature | WBsf648688 | ||||||||
| WBsf717393 | |||||||||
| WBsf236604 | |||||||||
| WBsf236605 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050603 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034288 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060437 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060439 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060438 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060440 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3617 | ||||||||
| Expr1023353 | |||||||||
| Expr1154311 | |||||||||
| Expr2005067 | |||||||||
| Expr2023287 | |||||||||
| Drives_construct | WBCnstr00031157 | ||||||||
| Construct_product | WBCnstr00011542 | ||||||||
| WBCnstr00031157 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction | WBInteraction000291449 | ||||||||
| WBInteraction000367614 | |||||||||
| WBInteraction000377861 | |||||||||
| WBInteraction000382359 | |||||||||
| WBInteraction000407100 | |||||||||
| WBInteraction000411754 | |||||||||
| WBInteraction000425784 | |||||||||
| WBInteraction000445810 | |||||||||
| WBInteraction000459988 | |||||||||
| Map_info | Map | X | Position | 14.4492 | |||||
| Positive | Positive_clone | K11E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
