WormBase Tree Display for Gene: WBGene00009576
expand all nodes | collapse all nodes | view schema
WBGene00009576 | SMap | S_parent | Sequence | F40F8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F40F8.3 | |||||||
Molecular_name | F40F8.3 | ||||||||
F40F8.3.1 | |||||||||
CE40361 | |||||||||
Other_name | CELE_F40F8.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F40F8.3 | ||||||||
DB_info | Database | AceView | gene | 2L421 | |||||
2L423 | |||||||||
WormQTL | gene | WBGene00009576 | |||||||
WormFlux | gene | WBGene00009576 | |||||||
NDB | locus_tag | CELE_F40F8.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009576|UniProtKB=Q20231 | |||||||
family | PTHR31965 | ||||||||
NCBI | gene | 185540 | |||||||
RefSeq | protein | NM_063986.5 | |||||||
TREEFAM | TREEFAM_ID | TF336306 | |||||||
TrEMBL | UniProtAcc | Q20231 | |||||||
UniProt_GCRP | UniProtAcc | Q20231 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jul 2006 09:57:08 | WBPerson1983 | Event | Split_into | WBGene00044917 | ||||
Split_into | WBGene00044917 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01499702 | ||||||||
WBVar01498435 | |||||||||
WBVar00377749 | |||||||||
WBVar00377750 | |||||||||
WBVar00377751 | |||||||||
WBVar01499606 | |||||||||
WBVar01499607 | |||||||||
WBVar00766993 | |||||||||
WBVar00766994 | |||||||||
WBVar00766995 | |||||||||
WBVar00766996 | |||||||||
WBVar00766997 | |||||||||
WBVar00766998 | |||||||||
WBVar00766999 | |||||||||
WBVar00767000 | |||||||||
WBVar01311399 | |||||||||
WBVar01498940 | |||||||||
WBVar01244505 | |||||||||
WBVar01244506 | |||||||||
WBVar02121139 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00067576 | ||||||||
Contained_in_operon | CEOP2520 | ||||||||
Ortholog (24) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human TMEM42 (transmembrane protein 42). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F40F8.3 | |||||||
Corresponding_CDS_history | F40F8.3:wp162 | ||||||||
Corresponding_transcript | F40F8.3.1 | ||||||||
Associated_feature | WBsf644652 | ||||||||
WBsf222100 | |||||||||
Experimental_info | RNAi_result (2) | ||||||||
Expr_pattern | Expr1011115 | ||||||||
Expr1034189 | |||||||||
Expr1150742 | |||||||||
Expr2003538 | |||||||||
Expr2021755 | |||||||||
Drives_construct | WBCnstr00032090 | ||||||||
Construct_product | WBCnstr00032090 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (64) | |||||||||
SAGE_tag | SAGE:aggacttaaaagaggaa | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:atcagcaggagccacca | Strand | Antisense | |||||||
SAGE:acttttgtcc | Strand | Antisense | |||||||
SAGE:aggacttaaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Map_info | Positive | Positive_clone | F40F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 3.32262 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |