WormBase Tree Display for Gene: WBGene00009287
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| WBGene00009287 | SMap | S_parent | Sequence | F31C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | psf-2 | Person_evidence | WBPerson350 | |||||
| Sequence_name | F31C3.5 | ||||||||
| Molecular_name | F31C3.5 | ||||||||
| F31C3.5.1 | |||||||||
| CE17734 | |||||||||
| Other_name | CELE_F31C3.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | psf-2 | ||||||||
| DB_info | Database | AceView | gene | 1P647 | |||||
| WormQTL | gene | WBGene00009287 | |||||||
| WormFlux | gene | WBGene00009287 | |||||||
| NDB | locus_tag | CELE_F31C3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009287|UniProtKB=O62193 | |||||||
| family | PTHR12772 | ||||||||
| NCBI | gene | 185146 | |||||||
| RefSeq | protein | NM_061226.3 | |||||||
| SwissProt | UniProtAcc | O62193 | |||||||
| TREEFAM | TREEFAM_ID | TF314359 | |||||||
| UniProt_GCRP | UniProtAcc | O62193 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2013 14:23:12 | WBPerson2970 | Name_change | CGC_name | psf-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | psf | ||||||||
| Allele | WBVar01499889 | ||||||||
| WBVar01498978 | |||||||||
| WBVar01498979 | |||||||||
| WBVar01499908 | |||||||||
| WBVar01500103 | |||||||||
| WBVar01499739 | |||||||||
| WBVar02156349 | |||||||||
| WBVar01499569 | |||||||||
| WBVar02123970 | |||||||||
| WBVar01499404 | |||||||||
| WBVar02124537 | |||||||||
| WBVar02123623 | |||||||||
| WBVar01498864 | |||||||||
| WBVar00695851 | |||||||||
| WBVar00695852 | |||||||||
| WBVar00695853 | |||||||||
| WBVar00695854 | |||||||||
| WBVar01499058 | |||||||||
| WBVar00695855 | |||||||||
| WBVar00695856 | |||||||||
| WBVar00695857 | |||||||||
| WBVar00353870 | |||||||||
| WBVar01715410 | |||||||||
| WBVar01498889 | |||||||||
| WBVar01498890 | |||||||||
| WBVar02123655 | |||||||||
| WBVar01500181 | |||||||||
| WBVar01499999 | |||||||||
| WBVar01499820 | |||||||||
| WBVar01498534 | |||||||||
| WBVar01499823 | |||||||||
| WBVar02123493 | |||||||||
| WBVar01499665 | |||||||||
| WBVar02123877 | |||||||||
| WBVar01498939 | |||||||||
| WBVar02122425 | |||||||||
| Strain | WBStrain00051124 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037271 | ||||||||
| 00037272 | |||||||||
| 00037273 | |||||||||
| 00037274 | |||||||||
| 00037275 | |||||||||
| 00037276 | |||||||||
| 00037277 | |||||||||
| 00037278 | |||||||||
| 00117025 | |||||||||
| 00117026 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in double-strand break repair via break-induced replication. Predicted to be located in nuclear chromosome. Predicted to be part of GINS complex. Is an ortholog of human GINS2 (GINS complex subunit 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F31C3.5 | |||||||
| Corresponding_transcript | F31C3.5.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature (2) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045997 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031611 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081363 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000040 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025337 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116678 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025338 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020907 | ||||||||
| Expr1034054 | |||||||||
| Expr1149896 | |||||||||
| Expr2015133 | |||||||||
| Expr2033371 | |||||||||
| Drives_construct | WBCnstr00032311 | ||||||||
| Construct_product | WBCnstr00032311 | ||||||||
| Antibody | WBAntibody00002866 | ||||||||
| WBAntibody00002988 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | I | Position | 29.8762 | |||||
| Positive | Positive_clone | F31C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040279 | |||||||||
| WBPaper00045289 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063040 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00066002 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
