WormBase Tree Display for Gene: WBGene00008356
expand all nodes | collapse all nodes | view schema
| WBGene00008356 | SMap | S_parent | Sequence | D1025 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspc-20 | Person_evidence | WBPerson655 | |||||
| Sequence_name | D1025.4 | ||||||||
| Molecular_name | D1025.4 | ||||||||
| D1025.4.1 | |||||||||
| CE17612 | |||||||||
| Other_name | CELE_D1025.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspc-20 | ||||||||
| DB_info | Database | AceView | gene | XP148 | |||||
| WormQTL | gene | WBGene00008356 | |||||||
| WormFlux | gene | WBGene00008356 | |||||||
| NDB | locus_tag | CELE_D1025.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008356|UniProtKB=G5ECP8 | |||||||
| family | PTHR31330 | ||||||||
| NCBI | gene | 181549 | |||||||
| RefSeq | protein | NM_078016.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318876 | |||||||
| TrEMBL | UniProtAcc | G5ECP8 | |||||||
| UniProt_GCRP | UniProtAcc | G5ECP8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspc | ||||||||
| Allele | WBVar01704241 | ||||||||
| WBVar01499887 | |||||||||
| WBVar01499519 | |||||||||
| WBVar01499888 | |||||||||
| WBVar01661451 | |||||||||
| WBVar01499710 | |||||||||
| WBVar02013900 | |||||||||
| WBVar01832133 | |||||||||
| WBVar01832134 | |||||||||
| WBVar01489271 | |||||||||
| WBVar01499028 | |||||||||
| WBVar01622219 | |||||||||
| WBVar01622220 | |||||||||
| WBVar01622221 | |||||||||
| WBVar01602477 | |||||||||
| WBVar01527888 | |||||||||
| WBVar01208828 | |||||||||
| WBVar00524457 | |||||||||
| WBVar00524458 | |||||||||
| WBVar01208829 | |||||||||
| WBVar01208830 | |||||||||
| WBVar02124983 | |||||||||
| WBVar01573045 | |||||||||
| WBVar01499686 | |||||||||
| WBVar01499687 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01704239 | |||||||||
| WBVar01500067 | |||||||||
| WBVar01704240 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (260) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in excretory gland cell and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; mianserin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1025.4 | |||||||
| Corresponding_transcript | D1025.4.1 | ||||||||
| Associated_feature | WBsf1007932 | ||||||||
| WBsf1007933 | |||||||||
| WBsf1024417 | |||||||||
| WBsf1024418 | |||||||||
| WBsf238242 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012513 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043361 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030330 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (4) | |||||||||
| Drives_construct | WBCnstr00033032 | ||||||||
| Construct_product | WBCnstr00033032 | ||||||||
| Microarray_results | SMD_D1025.4 | ||||||||
| A_12_P133345 | |||||||||
| Aff_D1025.4 | |||||||||
| GPL8304_CE_WBGene00008356_A | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (196) | |||||||||
| Map_info | Map | X | Position | 16.7321 | |||||
| Positive | Positive_clone | D1025 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064841 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
