WormBase Tree Display for Gene: WBGene00007919
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WBGene00007919 | SMap | S_parent | Sequence | C34C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 2I997 | |||||
WormQTL | gene | WBGene00007919 | |||||||
WormFlux | gene | WBGene00007919 | |||||||
NDB | locus_tag | CELE_C34C6.7 | |||||||
NCBI | gene | 174393 | |||||||
RefSeq | protein | NM_001267252.2 | |||||||
NM_001267253.3 | |||||||||
TrEMBL | UniProtAcc | B7WN89 | |||||||
B7WN88 | |||||||||
UniProt_GCRP | UniProtAcc | B7WN88 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 17 Feb 2017 10:41:21 | WBPerson2970 | Name_change | CGC_name | cup-16 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cup | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar01498435 | |||||||||
WBVar01695950 | |||||||||
WBVar01499917 | |||||||||
WBVar01626964 | |||||||||
WBVar00751827 | |||||||||
WBVar00751828 | |||||||||
WBVar00751829 | |||||||||
WBVar00751830 | |||||||||
WBVar00751831 | |||||||||
WBVar00751832 | |||||||||
WBVar00751833 | |||||||||
WBVar00751834 | |||||||||
WBVar00751835 | |||||||||
WBVar00751836 | |||||||||
WBVar01252151 | |||||||||
WBVar00751837 | |||||||||
WBVar00751838 | |||||||||
WBVar00751839 | |||||||||
WBVar00174125 | |||||||||
WBVar01499423 | |||||||||
WBVar00174126 | |||||||||
WBVar02147491 | |||||||||
WBVar01308752 | |||||||||
WBVar01935121 | |||||||||
WBVar01604357 | |||||||||
WBVar01498940 | |||||||||
WBVar00104697 | |||||||||
WBVar00104698 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00006496 | ||||||||
00006497 | |||||||||
00006498 | |||||||||
00006499 | |||||||||
00006500 | |||||||||
Ortholog (17) | |||||||||
Structured_description | Automated_description | Involved in endocytosis and lysosomal protein catabolic process. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34C6.7a | |||||||
C34C6.7b | |||||||||
Corresponding_CDS_history | C34C6.7:wp198 | ||||||||
Corresponding_transcript | C34C6.7a.1 | ||||||||
C34C6.7b.1 | |||||||||
Associated_feature | WBsf657989 | ||||||||
WBsf988799 | |||||||||
WBsf221805 | |||||||||
Experimental_info | RNAi_result (2) | ||||||||
Expr_pattern | Expr1022610 | ||||||||
Expr1033433 | |||||||||
Expr1145874 | |||||||||
Expr2010594 | |||||||||
Expr2028834 | |||||||||
Drives_construct | WBCnstr00033382 | ||||||||
Construct_product | WBCnstr00033382 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (267) | |||||||||
Interaction (170) | |||||||||
Map_info | Map | II | Position | 0.85112 | |||||
Positive | Positive_clone | C34C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00050677 | ||||||||
WBPaper00062388 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |