WormBase Tree Display for Gene: WBGene00007393
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| WBGene00007393 | SMap | S_parent | Sequence | C06H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-157 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C06H5.2 | ||||||||
| Molecular_name | C06H5.2 | ||||||||
| C06H5.2.1 | |||||||||
| CE40736 | |||||||||
| Other_name | CELE_C06H5.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-157 | ||||||||
| DB_info | Database | AceView | gene | 5S381 | |||||
| WormQTL | gene | WBGene00007393 | |||||||
| WormFlux | gene | WBGene00007393 | |||||||
| NDB | locus_tag | CELE_C06H5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007393|UniProtKB=O17578 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 182349 | |||||||
| RefSeq | protein | NM_075109.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322479 | |||||||
| TrEMBL | UniProtAcc | O17578 | |||||||
| UniProt_GCRP | UniProtAcc | O17578 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-157 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele | WBVar01499523 | ||||||||
| WBVar01499709 | |||||||||
| WBVar02122268 | |||||||||
| WBVar02099831 | |||||||||
| WBVar02096525 | |||||||||
| WBVar02100760 | |||||||||
| WBVar01499004 | |||||||||
| WBVar00053580 | |||||||||
| WBVar01499566 | |||||||||
| WBVar00053585 | |||||||||
| WBVar01464900 | |||||||||
| WBVar00053590 | |||||||||
| WBVar01464902 | |||||||||
| WBVar01464903 | |||||||||
| WBVar01464904 | |||||||||
| WBVar01464905 | |||||||||
| WBVar00053595 | |||||||||
| WBVar01498290 | |||||||||
| WBVar01977190 | |||||||||
| WBVar00053600 | |||||||||
| WBVar01977191 | |||||||||
| WBVar00053605 | |||||||||
| WBVar00053610 | |||||||||
| WBVar00053615 | |||||||||
| WBVar00053620 | |||||||||
| WBVar00053625 | |||||||||
| WBVar01689742 | |||||||||
| WBVar01689743 | |||||||||
| WBVar01689744 | |||||||||
| WBVar00053630 | |||||||||
| WBVar01689745 | |||||||||
| WBVar01689746 | |||||||||
| WBVar01689747 | |||||||||
| WBVar00053635 | |||||||||
| WBVar00053640 | |||||||||
| WBVar01596367 | |||||||||
| WBVar01596368 | |||||||||
| WBVar01596369 | |||||||||
| WBVar02122164 | |||||||||
| WBVar00596164 | |||||||||
| WBVar00596165 | |||||||||
| WBVar00596166 | |||||||||
| WBVar01637574 | |||||||||
| WBVar01637575 | |||||||||
| WBVar01637576 | |||||||||
| WBVar01637577 | |||||||||
| WBVar01637578 | |||||||||
| WBVar01693082 | |||||||||
| WBVar01637579 | |||||||||
| WBVar01693083 | |||||||||
| WBVar01693084 | |||||||||
| WBVar01637580 | |||||||||
| WBVar01637581 | |||||||||
| WBVar01693085 | |||||||||
| WBVar01637582 | |||||||||
| WBVar01637583 | |||||||||
| WBVar01637584 | |||||||||
| WBVar01637585 | |||||||||
| WBVar01490243 | |||||||||
| WBVar01499446 | |||||||||
| WBVar01694198 | |||||||||
| WBVar01694199 | |||||||||
| WBVar01694200 | |||||||||
| WBVar01694201 | |||||||||
| WBVar01998458 | |||||||||
| WBVar02123856 | |||||||||
| WBVar01845437 | |||||||||
| WBVar01090162 | |||||||||
| WBVar01845438 | |||||||||
| WBVar01090163 | |||||||||
| WBVar01845439 | |||||||||
| WBVar01845440 | |||||||||
| WBVar01090164 | |||||||||
| WBVar01845441 | |||||||||
| WBVar01090165 | |||||||||
| WBVar01845442 | |||||||||
| WBVar01090166 | |||||||||
| WBVar01090167 | |||||||||
| WBVar01090168 | |||||||||
| WBVar01498549 | |||||||||
| WBVar01090169 | |||||||||
| WBVar01090170 | |||||||||
| WBVar01090171 | |||||||||
| WBVar01090172 | |||||||||
| WBVar01090173 | |||||||||
| WBVar01090174 | |||||||||
| WBVar01090175 | |||||||||
| WBVar01090176 | |||||||||
| WBVar01090177 | |||||||||
| WBVar01090178 | |||||||||
| WBVar01090179 | |||||||||
| WBVar01499299 | |||||||||
| WBVar02008866 | |||||||||
| WBVar01991763 | |||||||||
| WBVar01991764 | |||||||||
| WBVar00484588 | |||||||||
| WBVar01498957 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (220) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AWC; DD neuron; head mesodermal cell; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including glp-1; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including Tunicamycin; levamisole; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06H5.2 | |||||||
| Corresponding_CDS_history | C06H5.2:wp172 | ||||||||
| Corresponding_transcript | C06H5.2.1 | ||||||||
| Associated_feature | WBsf1002761 | ||||||||
| WBsf1002762 | |||||||||
| WBsf1021356 | |||||||||
| WBsf233149 | |||||||||
| Experimental_info (7) | |||||||||
| Map_info | Map | V | Position | 13.3292 | Error | 0.002304 | |||
| Positive | Positive_clone | C06H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
