WormBase Tree Display for Gene: WBGene00004120
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WBGene00004120 | SMap | S_parent | Sequence | F29C12 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pqn | ||||||
Allele | WBVar01499702 | ||||||
WBVar01498435 | |||||||
WBVar01315876 | |||||||
WBVar01315878 | |||||||
WBVar01315879 | |||||||
WBVar01498828 | |||||||
WBVar01498829 | |||||||
WBVar01441309 | |||||||
WBVar01441312 | |||||||
WBVar02073845 | |||||||
WBVar00555145 | |||||||
WBVar00780042 | |||||||
WBVar00555146 | |||||||
WBVar00780043 | |||||||
WBVar00780044 | |||||||
WBVar00780045 | |||||||
WBVar00780046 | |||||||
WBVar00780047 | |||||||
WBVar00780048 | |||||||
WBVar00780049 | |||||||
WBVar00780050 | |||||||
WBVar00780051 | |||||||
WBVar00780052 | |||||||
WBVar00780053 | |||||||
WBVar00780054 | |||||||
WBVar00780055 | |||||||
WBVar00780056 | |||||||
WBVar00780057 | |||||||
WBVar00780058 | |||||||
WBVar00780059 | |||||||
WBVar01666902 | |||||||
WBVar01949701 | |||||||
WBVar00382042 | |||||||
WBVar00382043 | |||||||
WBVar00382044 | |||||||
WBVar00382045 | |||||||
WBVar00382046 | |||||||
WBVar01720969 | |||||||
WBVar02057065 | |||||||
WBVar01498941 | |||||||
WBVar01380883 | |||||||
WBVar01826684 | |||||||
WBVar01561060 | |||||||
WBVar01561061 | |||||||
WBVar01561062 | |||||||
WBVar01561063 | |||||||
WBVar01561064 | |||||||
WBVar01561065 | |||||||
WBVar01851580 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (27) | |||||||
Paralog (19) | |||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in hypodermis; interfacial epithelial cell; intestine; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-nine chemicals including hydrogen sulfide; Nitric Oxide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F29C12.1a | |||||
F29C12.1b | |||||||
Corresponding_transcript | F29C12.1a.1 | ||||||
F29C12.1b.1 | |||||||
Other_sequence (14) | |||||||
Associated_feature | WBsf644792 | ||||||
WBsf654921 | |||||||
WBsf654922 | |||||||
WBsf658342 | |||||||
WBsf990328 | |||||||
WBsf1013566 | |||||||
WBsf222328 | |||||||
WBsf222329 | |||||||
WBsf222330 | |||||||
WBsf222331 | |||||||
Experimental_info | RNAi_result | WBRNAi00045907 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014099 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1023612 | ||||||
Expr1031996 | |||||||
Expr1149810 | |||||||
Expr2015047 | |||||||
Expr2033282 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (274) | |||||||
Interaction (177) | |||||||
Map_info | Map | II | Position | 14.3984 | Error | 0.039877 | |
Positive | Positive_clone | F29C12 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00064306 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |