WormBase Tree Display for Gene: WBGene00002274
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WBGene00002274 | Evidence | Accession_evidence | EMBL | AB038502 | |||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F38A5 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lec | ||||||
Allele | WBVar00427236 | ||||||
WBVar00427237 | |||||||
WBVar00427238 | |||||||
WBVar00427239 | |||||||
WBVar00427240 | |||||||
WBVar00427241 | |||||||
WBVar00427242 | |||||||
WBVar01499395 | |||||||
WBVar01499396 | |||||||
WBVar02120505 | |||||||
WBVar00250920 | |||||||
WBVar01499633 | |||||||
WBVar00916897 | |||||||
WBVar00916898 | |||||||
WBVar00916899 | |||||||
WBVar00916900 | |||||||
WBVar00916901 | |||||||
WBVar00916902 | |||||||
WBVar00916903 | |||||||
WBVar00916904 | |||||||
WBVar00916905 | |||||||
WBVar00916906 | |||||||
WBVar00916907 | |||||||
WBVar00190126 | |||||||
WBVar00190127 | |||||||
WBVar01500245 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00087317 | ||||||
00087318 | |||||||
00087319 | |||||||
00087320 | |||||||
00087321 | |||||||
00087322 | |||||||
00110346 | |||||||
Ortholog (33) | |||||||
Paralog (26) | |||||||
Structured_description | Concise_description | lec-11 encodes a predicted member of the galectin family that shares highest similarity with lec-7 through lec-10 within the C-terminal tail and also shares a higher relative histidine content in common with lec-7 through lec-10; can bind sugar in vitro. | Paper_evidence | WBPaper00011877 | |||
Curator_confirmed | WBPerson48 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable galactoside binding activity. Involved in innate immune response. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F38A5.3a | |||||
Corresponding_CDS_history | F38A5.3b:wp240 | ||||||
Corresponding_transcript | F38A5.3b | ||||||
F38A5.3a.1 | |||||||
Other_sequence (11) | |||||||
Associated_feature | WBsf651854 | ||||||
WBsf230176 | |||||||
Experimental_info | RNAi_result | WBRNAi00095431 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014529 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046673 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095428 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095415 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr5991 | ||||||
Expr1021522 | |||||||
Expr1150548 | |||||||
Expr2013032 | |||||||
Expr2031264 | |||||||
Drives_construct | WBCnstr00003453 | ||||||
WBCnstr00036339 | |||||||
Construct_product | WBCnstr00036339 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (295) | |||||||
Interaction | WBInteraction000348806 | ||||||
WBInteraction000350495 | |||||||
WBInteraction000405645 | |||||||
WBInteraction000432845 | |||||||
WBInteraction000542656 | |||||||
Map_info | Map | IV | Position | 3.21089 | Error | 0.000399 | |
Positive | Positive_clone | F38A5 | Inferred_automatically (2) | ||||
Mapping_data | Multi_point | 5293 | |||||
4804 | |||||||
4840 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00011877 | ||||||
WBPaper00028482 | |||||||
WBPaper00032075 | |||||||
WBPaper00032196 | |||||||
WBPaper00032370 | |||||||
WBPaper00034766 | |||||||
WBPaper00037859 | |||||||
WBPaper00040257 | |||||||
WBPaper00062289 | |||||||
WBPaper00065225 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |