WormBase Tree Display for Gene: WBGene00002125
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WBGene00002125 | SMap | S_parent | Sequence | F22F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | inx-3 | Person_evidence | WBPerson247 | |||||
Sequence_name | F22F4.2 | ||||||||
Molecular_name | F22F4.2 | ||||||||
F22F4.2.1 | |||||||||
CE33055 | |||||||||
Other_name | opu-3 | ||||||||
CELE_F22F4.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | inx-3 | ||||||||
DB_info | Database (9) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | inx | ||||||||
Allele | WBVar00261870 | ||||||||
WBVar01151235 | |||||||||
WBVar01151236 | |||||||||
WBVar01151237 | |||||||||
WBVar01151238 | |||||||||
WBVar01151239 | |||||||||
WBVar01151240 | |||||||||
WBVar01151241 | |||||||||
WBVar01151242 | |||||||||
WBVar01151243 | |||||||||
WBVar01151244 | |||||||||
WBVar01151245 | |||||||||
WBVar01151246 | |||||||||
WBVar01151247 | |||||||||
WBVar01151248 | |||||||||
WBVar01151249 | |||||||||
WBVar01151250 | |||||||||
WBVar00505093 | |||||||||
WBVar00505094 | |||||||||
WBVar00505095 | |||||||||
WBVar00088527 | |||||||||
WBVar01550082 | |||||||||
WBVar01499262 | |||||||||
WBVar01880456 | |||||||||
WBVar01499283 | |||||||||
WBVar01758564 | |||||||||
WBVar00027066 | |||||||||
WBVar01469155 | |||||||||
WBVar00027071 | |||||||||
WBVar00091769 | |||||||||
WBVar01500067 | |||||||||
Legacy_information | [Barnes TM] opu for OPUS protein. | ||||||||
Strain | WBStrain00035658 | ||||||||
WBStrain00007118 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (46) | |||||||||
Paralog (24) | |||||||||
Structured_description | Automated_description | Enables actin filament binding activity and gap junction channel activity. Involved in embryonic morphogenesis and positive regulation of pharyngeal pumping. Located in cytoplasm and gap junction. Expressed in several structures, including arcade cell; cephalic sheath cell; neurons; pharyngeal cell; and rectum. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F22F4.2 | |||||||
Corresponding_CDS_history | F22F4.2:wp92 | ||||||||
Corresponding_transcript | F22F4.2.1 | ||||||||
Other_sequence (47) | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result | WBRNAi00027681 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092183 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062020 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027295 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025189 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066626 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013776 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066688 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045349 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00000925 | ||||||||
WBCnstr00010537 | |||||||||
WBCnstr00010849 | |||||||||
WBCnstr00013438 | |||||||||
WBCnstr00016939 | |||||||||
WBCnstr00036434 | |||||||||
Construct_product | WBCnstr00010849 | ||||||||
WBCnstr00036434 | |||||||||
WBCnstr00038753 | |||||||||
Antibody | WBAntibody00000617 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (275) | |||||||||
Interaction (150) | |||||||||
Map_info | Map | X | Position | -3.91398 | Error | 0.016666 | |||
Positive | Positive_clone | F22F4 | Person_evidence | WBPerson43 | |||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
Mapping_data | Multi_point | 4443 | |||||||
4456 | |||||||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |