WormBase Tree Display for Gene: WBGene00001331
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| WBGene00001331 | SMap | S_parent | Sequence | F09B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | erd-2.1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F09B9.3 | ||||||||
| Molecular_name | F09B9.3 | ||||||||
| F09B9.3.1 | |||||||||
| CE23635 | |||||||||
| Other_name | ERD2 | Accession_evidence | EMBL | AF081125 | |||||
| erd-2 | Person_evidence | WBPerson261 | |||||||
| sup-2 | Person_evidence | WBPerson261 | |||||||
| CELE_F09B9.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | erd-2.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 08 Nov 2018 16:58:35 | WBPerson1983 | Name_change | CGC_name | erd-2.1 | ||||
| Other_name | erd-2 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | erd | ||||||||
| Allele | WBVar01551672 | ||||||||
| WBVar00062259 | |||||||||
| WBVar01759030 | |||||||||
| WBVar01179127 | |||||||||
| WBVar01179128 | |||||||||
| WBVar01179129 | |||||||||
| WBVar01179130 | |||||||||
| WBVar01179131 | |||||||||
| WBVar01179132 | |||||||||
| WBVar01179133 | |||||||||
| WBVar02156399 | |||||||||
| WBVar01179134 | |||||||||
| WBVar00514509 | |||||||||
| WBVar00514510 | |||||||||
| WBVar00514511 | |||||||||
| WBVar00514512 | |||||||||
| WBVar01620212 | |||||||||
| WBVar00514513 | |||||||||
| WBVar01470722 | |||||||||
| WBVar02139947 | |||||||||
| WBVar02139948 | |||||||||
| WBVar01888418 | |||||||||
| WBVar01888419 | |||||||||
| WBVar01888420 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| Strain (2) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00016195 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | erd-2 encodes a protein with homology to human ER lumen protein retaining receptor 1. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ER retention sequence binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in cis-Golgi network and endoplasmic reticulum. Expressed in head and tail. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 21. Is an ortholog of human KDELR2 (KDEL endoplasmic reticulum protein retention receptor 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112201 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6305) | ||||
| Molecular_info | Corresponding_CDS | F09B9.3 | |||||||
| Corresponding_transcript | F09B9.3.1 | ||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf654307 | ||||||||
| WBsf670925 | |||||||||
| WBsf670926 | |||||||||
| WBsf670927 | |||||||||
| WBsf670928 | |||||||||
| WBsf237837 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044081 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076282 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012951 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086442 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086441 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1258 | ||||||||
| Expr5691 | |||||||||
| Expr1024480 | |||||||||
| Expr1030811 | |||||||||
| Expr1148047 | |||||||||
| Expr2011355 | |||||||||
| Expr2029591 | |||||||||
| Drives_construct | WBCnstr00003490 | ||||||||
| WBCnstr00036994 | |||||||||
| Construct_product | WBCnstr00036994 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | X | Position | 1.86492 | |||||
| Positive | Positive_clone | F09B9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028381 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058518 | |||||||||
| WBPaper00061353 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
