WormBase Tree Display for Gene: WBGene00017016

WBGene00017016 SMap: S_parent: Sequence: D1014
  Identity: Version: 3
    Name: CGC_name: snap-1 Person_evidence: WBPerson451
      Sequence_name: D1014.3
      Molecular_name: D1014.3a
        D1014.3a.1
        CE38494
        D1014.3b
        CE53052
        D1014.3b.1
        D1014.3b.2
        D1014.3b.3
      Other_name: phi-29 Person_evidence: WBPerson2582
        CELE_D1014.3 Accession_evidence: NDB BX284605
      Public_name: snap-1
    DB_info: Database: AceView gene 5I613
        WormQTL gene WBGene00017016
        WormFlux gene WBGene00017016
        NDB locus_tag CELE_D1014.3
        Panther gene CAEEL|WormBase=WBGene00017016|UniProtKB=Q18921
          family PTHR13768
        NCBI gene 179193
        RefSeq protein NM_001392555.1
            NM_072698.7
        TrEMBL UniProtAcc A0A486WXT8
            Q18921
        UniProt_GCRP UniProtAcc Q18921
        OMIM gene 611270
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Mar 2005 13:54:35 WBPerson2970 Name_change: Other_name: phi-29
        3 07 Sep 2006 08:05:50 WBPerson2970 Name_change: CGC_name: snap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snap
    Allele: WBVar01499899
      WBVar01499900
      WBVar00251013
      WBVar00464025
      WBVar00464026
      WBVar00464027
      WBVar00464028
      WBVar00464029
      WBVar00464030
      WBVar01500129
      WBVar01029171
      WBVar01862904
      WBVar01029172
      WBVar01029173
      WBVar01029174
      WBVar01029175
      WBVar01029176
      WBVar01029177
      WBVar02060311
      WBVar01029178
      WBVar02060312
      WBVar02060313
      WBVar01029179
      WBVar01029180
      WBVar01029181
      WBVar01029182
      WBVar01029183
      WBVar01029184
      WBVar01029185
      WBVar01029186
      WBVar01029187
      WBVar01029188
      WBVar01499056
      WBVar01484340
      WBVar01460871
      WBVar01460872
      WBVar01460873
      WBVar01460874
      WBVar01499316
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP5180
    Ortholog (48)
    Paralog: WBGene00013345 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044794 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in membrane. Predicted to be part of SNARE complex. Human ortholog(s) of this gene implicated in Alzheimer's disease; Down syndrome; and developmental and epileptic encephalopathy 107. Is an ortholog of human NAPA (NSF attachment protein alpha) and NAPB (NSF attachment protein beta). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070393 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:15751)
      DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:15751)
      DOID:14250 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:15751)
  Molecular_info: Corresponding_CDS: D1014.3a
      D1014.3b
    Corresponding_CDS_history: D1014.3:wp142
    Corresponding_transcript: D1014.3a.1
      D1014.3b.1
      D1014.3b.2
      D1014.3b.3
    Other_sequence (35)
    Associated_feature: WBsf646987
      WBsf646988
      WBsf661465
      WBsf661466
      WBsf981966
      WBsf1000585
      WBsf232064
      WBsf232065
  Experimental_info: RNAi_result: WBRNAi00100385 Inferred_automatically: RNAi_primary
      WBRNAi00094141 Inferred_automatically: RNAi_primary
      WBRNAi00100198 Inferred_automatically: RNAi_primary
      WBRNAi00108864 Inferred_automatically: RNAi_primary
      WBRNAi00071549 Inferred_automatically: RNAi_primary
      WBRNAi00099584 Inferred_automatically: RNAi_primary
      WBRNAi00100011 Inferred_automatically: RNAi_primary
      WBRNAi00000161 Inferred_automatically: RNAi_primary
      WBRNAi00100572 Inferred_automatically: RNAi_primary
      WBRNAi00008568 Inferred_automatically: RNAi_primary
      WBRNAi00100759 Inferred_automatically: RNAi_primary
      WBRNAi00108919 Inferred_automatically: RNAi_primary
      WBRNAi00090884 Inferred_automatically: RNAi_primary
      WBRNAi00099180 Inferred_automatically: RNAi_primary
      WBRNAi00066838 Inferred_automatically: RNAi_primary
      WBRNAi00085394 Inferred_automatically: RNAi_primary
      WBRNAi00064982 Inferred_automatically: RNAi_primary
      WBRNAi00071721 Inferred_automatically: RNAi_primary
      WBRNAi00109085 Inferred_automatically: RNAi_primary
      WBRNAi00111718 Inferred_automatically: RNAi_primary
      WBRNAi00099382 Inferred_automatically: RNAi_primary
      WBRNAi00030319 Inferred_automatically: RNAi_primary
      WBRNAi00076254 Inferred_automatically: RNAi_primary
      WBRNAi00043342 Inferred_automatically: RNAi_primary
      WBRNAi00100946 Inferred_automatically: RNAi_primary
      WBRNAi00099786 Inferred_automatically: RNAi_primary
      WBRNAi00109029 Inferred_automatically: RNAi_primary
      WBRNAi00024932 Inferred_automatically: RNAi_primary
      WBRNAi00071548 Inferred_automatically: RNAi_primary
      WBRNAi00108809 Inferred_automatically: RNAi_primary
      WBRNAi00094273 Inferred_automatically: RNAi_primary
      WBRNAi00108974 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5609
      Expr1016527
      Expr1037312
      Expr1147322
      Expr2015937
      Expr2034170
    Drives_construct: WBCnstr00004056
      WBCnstr00027636
    Construct_product: WBCnstr00027636
    Microarray_results (21)
    Expression_cluster (101)
    Interaction (85)
  Map_info: Map: V Position: 1.04508 Error: 0.011611
    Positive: Positive_clone: D1014 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene