WormBase Tree Display for Gene: WBGene00011610
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| WBGene00011610 | SMap | S_parent | Sequence | T08D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T08D2.5 | |||||||
| Molecular_name | T08D2.5 | ||||||||
| T08D2.5.1 | |||||||||
| CE21171 | |||||||||
| T08D2.5.2 | |||||||||
| Other_name | CELE_T08D2.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T08D2.5 | ||||||||
| DB_info | Database | AceView | gene | XA807 | |||||
| XA806 | |||||||||
| WormQTL | gene | WBGene00011610 | |||||||
| WormFlux | gene | WBGene00011610 | |||||||
| NDB | locus_tag | CELE_T08D2.5 | |||||||
| NCBI | gene | 188283 | |||||||
| RefSeq | protein | NM_001392711.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322499 | |||||||
| TrEMBL | UniProtAcc | A4F322 | |||||||
| UniProt_GCRP | UniProtAcc | A4F322 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01986784 | ||||||||
| WBVar01499914 | |||||||||
| WBVar00491810 | |||||||||
| WBVar00491811 | |||||||||
| WBVar00491812 | |||||||||
| WBVar00491813 | |||||||||
| WBVar00491814 | |||||||||
| WBVar01498638 | |||||||||
| WBVar00491815 | |||||||||
| WBVar00491816 | |||||||||
| WBVar00074176 | |||||||||
| WBVar00302335 | |||||||||
| WBVar01617807 | |||||||||
| WBVar01499246 | |||||||||
| WBVar01111313 | |||||||||
| WBVar01111314 | |||||||||
| WBVar01111315 | |||||||||
| WBVar01111316 | |||||||||
| WBVar00600942 | |||||||||
| WBVar01111317 | |||||||||
| WBVar01111318 | |||||||||
| WBVar01111319 | |||||||||
| WBVar01111320 | |||||||||
| WBVar01111321 | |||||||||
| WBVar01111322 | |||||||||
| WBVar01111323 | |||||||||
| WBVar01111324 | |||||||||
| WBVar01111325 | |||||||||
| WBVar01498344 | |||||||||
| WBVar00264766 | |||||||||
| WBVar02078781 | |||||||||
| WBVar00260922 | |||||||||
| WBVar01498776 | |||||||||
| WBVar01467243 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX004 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00020467 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD; germline precursor cell; hypodermis; and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; D-glucose; and tert-Butylhydroperoxide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08D2.5 | |||||||
| Corresponding_transcript | T08D2.5.1 | ||||||||
| T08D2.5.2 | |||||||||
| Other_sequence | CBC00501_1 | ||||||||
| CRC11654_1 | |||||||||
| CR05611 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00094781 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018442 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076662 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062364 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004210 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053220 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077889 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035352 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052865 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018441 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063628 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052866 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024163 | ||||||||
| Expr1156465 | |||||||||
| Expr2006001 | |||||||||
| Expr2024217 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (70) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | T08D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -20.6129 | |||||||
| Method | Gene |
