WormBase Tree Display for Gene: WBGene00003658
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| WBGene00003658 | SMap | S_parent | Sequence | H12C20 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-68 | Person_evidence | WBPerson600 | |||||
| Sequence_name | H12C20.3 | ||||||||
| Molecular_name | H12C20.3a | ||||||||
| H12C20.3a.1 | |||||||||
| CE18808 | |||||||||
| H12C20.3b | |||||||||
| CE47189 | |||||||||
| H12C20.3b.1 | |||||||||
| Other_name | CELE_H12C20.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-68 | ||||||||
| DB_info | Database | AceView | gene | 5M55 | |||||
| WormQTL | gene | WBGene00003658 | |||||||
| WormFlux | gene | WBGene00003658 | |||||||
| NDB | locus_tag | CELE_H12C20.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003658|UniProtKB=Q9XXM8 | |||||||
| family | PTHR24083 | ||||||||
| NCBI | gene | 179589 | |||||||
| RefSeq | protein | NM_001380769.3 | |||||||
| NM_001380770.1 | |||||||||
| SwissProt | UniProtAcc | Q9XXM8 | |||||||
| TrEMBL | UniProtAcc | H8ESE6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXM8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele | WBVar00470985 | ||||||||
| WBVar01499337 | |||||||||
| WBVar00470986 | |||||||||
| WBVar01974847 | |||||||||
| WBVar00146032 | |||||||||
| WBVar01499904 | |||||||||
| WBVar01499905 | |||||||||
| WBVar01499547 | |||||||||
| WBVar02151651 | |||||||||
| WBVar01866005 | |||||||||
| WBVar01866006 | |||||||||
| WBVar00146074 | |||||||||
| WBVar01049627 | |||||||||
| WBVar01049628 | |||||||||
| WBVar01049629 | |||||||||
| WBVar01049630 | |||||||||
| WBVar01049631 | |||||||||
| WBVar01049632 | |||||||||
| WBVar01049633 | |||||||||
| WBVar01049634 | |||||||||
| WBVar01049635 | |||||||||
| WBVar01049636 | |||||||||
| WBVar01049637 | |||||||||
| WBVar01484716 | |||||||||
| WBVar01049638 | |||||||||
| WBVar01484717 | |||||||||
| WBVar01049639 | |||||||||
| WBVar01049640 | |||||||||
| WBVar00257208 | |||||||||
| WBVar01500208 | |||||||||
| WBVar01500209 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01743576 | |||||||||
| WBVar01743577 | |||||||||
| Strain | WBStrain00036665 | ||||||||
| WBStrain00036726 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Part of chromatin. Expressed in head muscle and head neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H12C20.3a | |||||||
| H12C20.3b | |||||||||
| Corresponding_transcript | H12C20.3a.1 | ||||||||
| H12C20.3b.1 | |||||||||
| Other_sequence | FD514463.1 | ||||||||
| FD515477.1 | |||||||||
| FD514165.1 | |||||||||
| CBC10258_1 | |||||||||
| CSC00785_1 | |||||||||
| Associated_feature | WBsf647277 | ||||||||
| WBsf647278 | |||||||||
| WBsf661751 | |||||||||
| WBsf978297 | |||||||||
| WBsf232522 | |||||||||
| WBsf232523 | |||||||||
| WBsf232524 | |||||||||
| Transcription_factor | WBTranscriptionFactor000706 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00106876 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049367 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023509 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107494 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107599 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033696 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016239 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107101 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107538 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107415 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00012742 | ||||||||
| WBCnstr00015294 | |||||||||
| WBCnstr00015295 | |||||||||
| WBCnstr00015296 | |||||||||
| WBCnstr00035965 | |||||||||
| Construct_product | WBCnstr00035965 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (212) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 3.20786 | Error | 0.000254 | |||
| Positive | Positive_clone | H12C20 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (17) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
