WormBase Tree Display for Gene: WBGene00016150
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| WBGene00016150 | SMap | S_parent | Sequence | C26F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hint-3 | |||||||
| Sequence_name | C26F1.7 | ||||||||
| Molecular_name | C26F1.7a | ||||||||
| C26F1.7a.1 | |||||||||
| CE06881 | |||||||||
| C26F1.7b | |||||||||
| CE44443 | |||||||||
| C26F1.7b.1 | |||||||||
| Other_name | CELE_C26F1.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | hint-3 | ||||||||
| DB_info | Database | AceView | gene | 5I239 | |||||
| WormQTL | gene | WBGene00016150 | |||||||
| WormFlux | gene | WBGene00016150 | |||||||
| NDB | locus_tag | CELE_C26F1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016150|UniProtKB=D3KFR7 | |||||||
| family | PTHR12486 | ||||||||
| NCBI | gene | 182943 | |||||||
| RefSeq | protein | NM_001269160.3 | |||||||
| NM_001269161.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF353069 | |||||||
| TrEMBL | UniProtAcc | D3KFR7 | |||||||
| Q18227 | |||||||||
| UniProt_GCRP | UniProtAcc | D3KFR7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Mar 2008 15:00:29 | WBPerson2970 | Name_change | CGC_name | hint-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hint | ||||||||
| Allele | WBVar01026924 | ||||||||
| WBVar01026925 | |||||||||
| WBVar01026926 | |||||||||
| WBVar01026927 | |||||||||
| WBVar01026928 | |||||||||
| WBVar01499740 | |||||||||
| WBVar00320789 | |||||||||
| WBVar01500129 | |||||||||
| WBVar01974344 | |||||||||
| WBVar02023990 | |||||||||
| WBVar01974345 | |||||||||
| WBVar01974346 | |||||||||
| WBVar00213077 | |||||||||
| WBVar00213078 | |||||||||
| WBVar00213079 | |||||||||
| WBVar00213080 | |||||||||
| WBVar00213081 | |||||||||
| WBVar00213082 | |||||||||
| WBVar00213083 | |||||||||
| WBVar02079254 | |||||||||
| WBVar00213084 | |||||||||
| WBVar01741452 | |||||||||
| WBVar00213085 | |||||||||
| WBVar01741453 | |||||||||
| WBVar00213086 | |||||||||
| WBVar02090871 | |||||||||
| WBVar01499056 | |||||||||
| WBVar00318941 | |||||||||
| WBVar01589969 | |||||||||
| WBVar01589970 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00322648 | |||||||||
| WBVar00463244 | |||||||||
| WBVar00463245 | |||||||||
| WBVar00463246 | |||||||||
| WBVar00463247 | |||||||||
| WBVar00463248 | |||||||||
| WBVar01500066 | |||||||||
| Strain | WBStrain00055400 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007319 | ||||||||
| 00007320 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human HINT3 (histidine triad nucleotide binding protein 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26F1.7a | |||||||
| C26F1.7b | |||||||||
| Corresponding_transcript (2) | |||||||||
| Other_sequence | Oden_isotig09917 | ||||||||
| ACC02660_1 | |||||||||
| PTC04748_1 | |||||||||
| TDC00564_1 | |||||||||
| Oden_isotig09918 | |||||||||
| CB039009.1 | |||||||||
| Dviv_isotig11060 | |||||||||
| EX566362.1 | |||||||||
| Acan_isotig04078 | |||||||||
| Acan_isotig04079 | |||||||||
| PT00220 | |||||||||
| FC817544.1 | |||||||||
| Name_isotig01301 | |||||||||
| SRC02395_1 | |||||||||
| EX012611.1 | |||||||||
| SR02344 | |||||||||
| Tcol_isotig16733 | |||||||||
| Dviv_isotig19288 | |||||||||
| PPC01488_1 | |||||||||
| Oden_isotig09916 | |||||||||
| CBC08175_1 | |||||||||
| EX557948.1 | |||||||||
| Dviv_isotig11063 | |||||||||
| EX012612.1 | |||||||||
| Dviv_isotig11062 | |||||||||
| EX013871.1 | |||||||||
| JI179129.1 | |||||||||
| Hbac_isotig04987 | |||||||||
| Dviv_isotig11061 | |||||||||
| Associated_feature | WBsf646952 | ||||||||
| WBsf646953 | |||||||||
| WBsf1000505 | |||||||||
| WBsf1000506 | |||||||||
| WBsf1000507 | |||||||||
| WBsf1000508 | |||||||||
| WBsf1000509 | |||||||||
| WBsf1019946 | |||||||||
| WBsf1019947 | |||||||||
| WBsf1019948 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041285 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029241 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014508 | ||||||||
| Expr1036909 | |||||||||
| Expr1145326 | |||||||||
| Expr2012435 | |||||||||
| Expr2030671 | |||||||||
| Drives_construct | WBCnstr00028289 | ||||||||
| Construct_product | WBCnstr00028289 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000225277 | ||||||||
| WBInteraction000312852 | |||||||||
| WBInteraction000394775 | |||||||||
| WBInteraction000574218 | |||||||||
| WBInteraction000574580 | |||||||||
| Map_info | Map | V | Position | 0.875834 | Error | 0.004958 | |||
| Positive | Positive_clone | C26F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
