WormBase Tree Display for Gene: WBGene00011891
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| WBGene00011891 | SMap | S_parent | Sequence | T21C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | del-6 | Person_evidence | WBPerson260 | |||||
| WBPerson145 | |||||||||
| Sequence_name | T21C9.3 | ||||||||
| Molecular_name | T21C9.3a | ||||||||
| T21C9.3a.1 | |||||||||
| CE43799 | |||||||||
| T21C9.3b | |||||||||
| CE43784 | |||||||||
| T21C9.3a.2 | |||||||||
| T21C9.3a.3 | |||||||||
| T21C9.3b.1 | |||||||||
| Other_name | CELE_T21C9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | del-6 | ||||||||
| DB_info | Database | AceView | gene | 5L55 | |||||
| WormQTL | gene | WBGene00011891 | |||||||
| WormFlux | gene | WBGene00011891 | |||||||
| NDB | locus_tag | CELE_T21C9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011891|UniProtKB=Q8MPW0 | |||||||
| family | PTHR11690 | ||||||||
| NCBI | gene | 179474 | |||||||
| RefSeq | protein | NM_001380748.1 | |||||||
| NM_171534.9 | |||||||||
| TREEFAM | TREEFAM_ID | TF325327 | |||||||
| TrEMBL | UniProtAcc | Q8MPW0 | |||||||
| Q8MPW1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MPW0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | del-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | del | ||||||||
| Allele | WBVar01500097 | ||||||||
| WBVar01500129 | |||||||||
| WBVar01043571 | |||||||||
| WBVar01043572 | |||||||||
| WBVar01043573 | |||||||||
| WBVar01043574 | |||||||||
| WBVar01043575 | |||||||||
| WBVar01499450 | |||||||||
| WBVar01043576 | |||||||||
| WBVar01499451 | |||||||||
| WBVar01043577 | |||||||||
| WBVar01043578 | |||||||||
| WBVar01043579 | |||||||||
| WBVar01043580 | |||||||||
| WBVar01043581 | |||||||||
| WBVar01864978 | |||||||||
| WBVar01043582 | |||||||||
| WBVar01043583 | |||||||||
| WBVar01043584 | |||||||||
| WBVar01043585 | |||||||||
| WBVar01043586 | |||||||||
| WBVar01043587 | |||||||||
| WBVar01043588 | |||||||||
| WBVar01043589 | |||||||||
| WBVar01043590 | |||||||||
| WBVar01043591 | |||||||||
| WBVar01043592 | |||||||||
| WBVar01500208 | |||||||||
| WBVar01500209 | |||||||||
| WBVar01743180 | |||||||||
| WBVar01743181 | |||||||||
| WBVar00256860 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00468946 | |||||||||
| WBVar00468947 | |||||||||
| WBVar00468948 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T21C9.3a | |||||||
| T21C9.3b | |||||||||
| Corresponding_CDS_history (2) | |||||||||
| Corresponding_transcript | T21C9.3a.1 | ||||||||
| T21C9.3a.2 | |||||||||
| T21C9.3a.3 | |||||||||
| T21C9.3b.1 | |||||||||
| Corresponding_pseudogene_history | T21C9.3:wp82 | ||||||||
| Other_sequence | Tcol_isotig04180 | ||||||||
| MJ04933 | |||||||||
| CR08407 | |||||||||
| FD515741.1 | |||||||||
| CRC11672_1 | |||||||||
| SRC01072_1 | |||||||||
| SSC00117_1 | |||||||||
| DA05184 | |||||||||
| CR09031 | |||||||||
| Dviv_isotig17130 | |||||||||
| JI171843.1 | |||||||||
| SS01443 | |||||||||
| GR978820.1 | |||||||||
| CSC00811_1 | |||||||||
| AE03751 | |||||||||
| CR03546 | |||||||||
| SC00421 | |||||||||
| AYC02506_1 | |||||||||
| Hbac_isotig01787 | |||||||||
| CJC02270_1 | |||||||||
| Tcir_isotig20750 | |||||||||
| GR367569.1 | |||||||||
| Oden_isotig17721 | |||||||||
| Oden_isotig23339 | |||||||||
| SR02303 | |||||||||
| CRC11785_1 | |||||||||
| CR09032 | |||||||||
| SSC06543_1 | |||||||||
| Acan_isotig08056 | |||||||||
| CRC02023_1 | |||||||||
| DAC02619_1 | |||||||||
| Dviv_isotig17131 | |||||||||
| FC816773.1 | |||||||||
| Associated_feature | WBsf1001142 | ||||||||
| WBsf232396 | |||||||||
| WBsf232397 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065616 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035752 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061891 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053719 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018110 | ||||||||
| Expr1035242 | |||||||||
| Expr1157269 | |||||||||
| Expr2010852 | |||||||||
| Expr2029090 | |||||||||
| Drives_construct | WBCnstr00030307 | ||||||||
| Construct_product | WBCnstr00030307 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (180) | |||||||||
| Interaction | WBInteraction000540406 | ||||||||
| WBInteraction000583296 | |||||||||
| Map_info | Map | V | Position | 2.60085 | |||||
| Positive | Positive_clone | T21C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064563 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
