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WormBase Tree Display for Gene: WBGene00004432

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Name Class

WBGene00004432SMapS_parentSequenceE04A4
IdentityVersion1
NameCGC_namerpl-20
Sequence_nameE04A4.8
Molecular_nameE04A4.8
E04A4.8.1
CE21392
Other_nameE04A4.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_E04A4.8Accession_evidenceNDBBX284604
Public_namerpl-20
DB_infoDatabaseAceViewgene4F516
WormQTLgeneWBGene00004432
NDBlocus_tagCELE_E04A4.8
PanthergeneCAEEL|WormBase=WBGene00004432|UniProtKB=O44480
familyPTHR10052
NCBIgene24104384
RefSeqproteinNM_001307285.5
SwissProtUniProtAccO44480
TREEFAMTREEFAM_IDTF300086
UniProt_GCRPUniProtAccO44480
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
AlleleWBVar00093417
WBVar01990870
WBVar01499790
WBVar00906736
WBVar00906737
WBVar00572329
WBVar00906738
WBVar00906739
WBVar01499242
WBVar00906740
WBVar00906741
WBVar00906742
WBVar00423991
WBVar00423992
WBVar01499633
WBVar01727511
WBVar01500245
Legacy_informationOrthologous to yeast (S.cerevisiae) ribosomal protein rpl20 using blastP
StrainWBStrain00036857
RNASeq_FPKM (74)
GO_annotation00032520
00032521
00032522
00112862
00112863
00112864
Contained_in_operonCEOP4148
Ortholog (52)
Structured_descriptionConcise_descriptionrpl-20 encodes a large ribosomal subunit L18a protein.Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL18A (ribosomal protein L18a).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE04A4.8
Corresponding_transcriptE04A4.8.1
Other_sequenceMA01681
Hbac_isotig00182
GO239267.1
FE919933.1
GO240146.1
HBC12017_1
GW409581.1
GO252912.1
JK315245.1
BUC00749_1
FG589094.1
CBC00443_1
ES743099.1
MC05140
MP00117
EX912115.1
GR979329.1
ES743680.1
PT00822
EX916357.1
EX916466.1
FD517188.1
FE918437.1
SR01038
BU585800.1
FC810073.1
FE911221.1
NBC06639_1
TDC00143_1
FD517641.1
CN478442.1
AS03206
HG06236
Acan_isotig14295
ES564024.1
PTC04540_1
BF718928.1
GO251112.1
HC06239
CJC00704_1
ASC17351_1
FD515843.1
MI01252
EX008311.1
GO249985.1
FD516485.1
NAC01286_1
NB07591
ZPC00045_1
OOC00303_1
GO252929.1
AE04605
BG734486.1
FE918398.1
ES410787.1
ES411918.1
PSC01316
CR09183
CR02846
FE910305.1
CJC07981_1
MP02263
HGC01887_1
EX915624.1
GE637818.1
TSC02258_1
PPC00142_1
EX012300.1
FC821050.1
GW411528.1
PSC04776_1
MCC01580_1
TV00779
ES741754.1
EX557336.1
AW313009.1
CBC05897_1
FC811976.1
ES742417.1
Dviv_isotig15148
PTC03421_1
GP01281
ASC38274_1
FE909435.1
BE132588.1
FC820977.1
FC815028.1
FE916807.1
BMC00864_1
FE919229.1
GW408249.1
Dviv_isotig15149
AS05123
ES412136.1
FE911269.1
EX914305.1
MH02651
RS06258
FE915657.1
HGC06484_1
TSC06367_1
FE918994.1
FC821603.1
Oden_isotig11139
FE910281.1
FC820946.1
CBC05041_1
EX014877.1
ACC01687_1
FE910754.1
Oden_isotig11137
AA294149.1
CRC02188_1
SC01497
EX008250.1
PT00977
Tcir_isotig08247
ZP00057
GW409499.1
EX013161.1
FE918188.1
BXC00110_1
OVC01080_1
EX915495.1
GR16856
JI216467.1
ES744557.1
MPC01782_1
EX913283.1
CR06732
CK850087.1
EX008575.1
FE911656.1
Tcol_isotig11654
TV00322
FC821657.1
FE918854.1
SRC00131_1
PTC00024_1
MHC11785_1
JI179561.1
ES742679.1
GR367868.1
BMC12222_1
Name_isotig02476
ALC00068_1
GR16855
HG05243
JI468297.1
Tcol_isotig11653
JI459567.1
MAC00988_1
AI308656.1
ES412095.1
JO468689.1
FE907363.1
BMC00060_2
EX915501.1
ES412754.1
ES739308.1
HG10153
EX916114.1
PP00604
HG00149
CD455714.1
EX557685.1
FE914223.1
BMC12224_1
PTC02958_1
CRC00258_1
CR05290
MJ00553
FC821575.1
GR11935
Oden_isotig11138
EX911781.1
HC04439
BU585433.1
SRC00059_1
ES412696.1
XIC05286_1
Acan_isotig13638
PT03832
CR09664
NBC03713_1
EX913308.1
MJ02253
FC815442.1
HGC00353_1
Acan_isotig18895
HBC00266_1
AE01072
AS07979
EX912652.1
JI180190.1
ASC00237_1
MJC00288_1
EX910010.1
AYC00096_1
MPC00106_1
CSC01764_1
AS15394
FG589162.1
FC816650.1
HG01451
FE914632.1
MHC02738_1
ES740516.1
PTC00233_1
XI01236
CBC11623_1
FE907931.1
ES742723.1
AS03346
HG03485
MIC00258_1
RS10375
HG10178
SR01203
MH10362
ES410030.1
TVC00198_1
SS01372
PT04431
CR08734
FE918160.1
ES743167.1
WBC00534_1
HG10219
BF482150.1
ACC07200_1
BF599247.1
FC809706.1
BU586090.1
FE919545.1
GPC00724_1
SSC00294_1
CBC05971_1
MH01307
AI603822.1
FE905579.1
HC00456
Name_isotig06905
CRC01105_1
HG11716
HGC12153_1
FC821036.1
HC02796
HC02081
HG10589
AI438756.1
CA840804.1
PT00277
ES743522.1
ASC10919_1
HCC00409_1
Tcir_isotig08139
ES412649.1
HC02558
GRC05757_1
Dviv_isotig15147
HC06131
NB06466
EX012886.1
XI04692
FE919649.1
XIC01650_1
EX565230.1
AS13966
GRC00128_1
CBC10951_1
HG11732
CB043602.1
RSC00050_1
EX916270.1
EX010896.1
BU586078.1
FE914534.1
EX914150.1
MC00945
Associated_featureWBsf651776
WBsf655509
WBsf667907
WBsf667908
WBsf667909
WBsf230009
WBsf230010
Experimental_infoRNAi_result (11)
Expr_patternChronogram1039
Chronogram1040
Chronogram1163
Chronogram1520
Expr1028502
Expr1032236
Expr1147652
Expr2015449
Expr2033684
Drives_constructWBCnstr00035490
Construct_productWBCnstr00035490
Microarray_results (26)
Expression_cluster (174)
Interaction (284)
Map_infoMapIVPosition0.819756Error0.017114
PositivePositive_cloneE04A4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (12)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene