WormBase Tree Display for Gene: WBGene00002850

WBGene00002850 SMap: S_parent: Sequence: C16A3
  Identity: Version: 2
    Name: CGC_name: let-716 Person_evidence: WBPerson533
      Sequence_name: C16A3.3
      Molecular_name: C16A3.3
        C16A3.3.1
        CE27690
      Other_name: CELE_C16A3.3 Accession_evidence: NDB BX284603
      Public_name: let-716
    DB_info: Database: WormQTL gene WBGene00002850
        WormFlux gene WBGene00002850
        NDB locus_tag CELE_C16A3.3
        Panther gene CAEEL|WormBase=WBGene00002850|UniProtKB=Q18038
          family PTHR23270
        NCBI gene 175906
        RefSeq protein NM_065997.5
        TREEFAM TREEFAM_ID TF105697
        TrEMBL UniProtAcc Q18038
        UniProt_GCRP UniProtAcc Q18038
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:29 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 30 Jan 2008 10:06:04 WBPerson2970 Event: Acquires_merge: WBGene00015808
              Name_change: Sequence_name: C16A3.3
      Acquires_merge: WBGene00015808
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: let
    Allele: WBVar00242302 Inferred_automatically: From strain object: BC4167
      WBVar00242380
      WBVar01500260
      WBVar01656840
      WBVar01656841
      WBVar01656842
      WBVar01628601
      WBVar01628602
      WBVar01264365
      WBVar00602672
      WBVar00833295
      WBVar00833296
      WBVar01446146
      WBVar00833297
      WBVar01446147
      WBVar01446148
      WBVar00833298
      WBVar00833299
      WBVar02132163
      WBVar01446149
      WBVar00833300
      WBVar00833301
      WBVar00833302
      WBVar00833303
      WBVar00833304
      WBVar00833305
      WBVar00833306
      WBVar00833307
      WBVar00833308
      WBVar00833309
      WBVar00833310
      WBVar00833311
      WBVar00833312
      WBVar00399728
      WBVar00833313
      WBVar00399729
      WBVar00399730
      WBVar00833314
      WBVar00833315
      WBVar00399731
      WBVar00399732
      WBVar00833316
      WBVar00833317
      WBVar00399733
      WBVar00833318
      WBVar00399734
      WBVar00399735
      WBVar00833319
      WBVar00833320
      WBVar00399736
      WBVar00833321
      WBVar00399737
      WBVar00399738
      WBVar00833322
      WBVar00833323
      WBVar00833324
      WBVar00833325
      WBVar00833326
      WBVar00833327
      WBVar00833328
      WBVar00057160
      WBVar00833329
      WBVar00833330
      WBVar00833331
    Legacy_information: [Stewart HI] homozygotes arrest at early larval stage
      [C.elegansII] s2457 : early larval lethal. OA1: s2626 (similar). [BC]
    Strain: WBStrain00000771
    RNASeq_FPKM (74)
    GO_annotation: 00060046
      00060047
      00060048
      00060049
      00060050
      00110407
      00110408
      00110409
    Contained_in_operon: CEOP3368
    Ortholog (39)
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human PDCD11 (programmed cell death 11). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C16A3.3
    Corresponding_transcript: C16A3.3.1
    Other_sequence: Tcol_isotig16954
      BU666188.1
      JI170983.1
      Acan_isotig07515
      Tcir_isotig06480
      PTC02877_1
      Acan_isotig17402
      HBC20004_1
      SS02606
      Oden_isotig10317
      FG348269.1
      JI171870.1
      NAC00895_1
      JI215638.1
      SSC04387_1
      CR04287
      Acan_isotig13712
      PSC02876_1
      PT03579
      Dviv_isotig23218
      Tcol_isotig21072
      Hbac_isotig05675
      Oden_isotig10316
      Oden_isotig10319
      GW408887.1
      JI164143.1
      ES413688.1
      CJC14241_1
      Name_isotig03763
      Oden_isotig21664
      Oden_isotig10315
      PP01785
      Oden_isotig10318
      Hbac_isotig05066
      CRC02191_1
    Associated_feature: WBsf659070
      WBsf225096
  Experimental_info: RNAi_result (24)
    Expr_pattern: Expr1013064
      Expr1031366
      Expr1144708
      Expr2013072
      Expr2031304
    Microarray_results (19)
    Expression_cluster (121)
    SAGE_tag (21)
    Interaction (353)
  Map_info: Map: III Position: -1.31646 Error: 0.00703
    Well_ordered
    Positive: Inside_rearr: sDf127
        sDf125
        sDp3
      Positive_clone: C16A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 3328
      Pos_neg_data: 8680
        8695
        8708
        8711
        8753
        8770
        9198
  Reference: WBPaper00002901
    WBPaper00003304
    WBPaper00015389
    WBPaper00023496
    WBPaper00028451
    WBPaper00031176
    WBPaper00038491
    WBPaper00055090
  Remark: Rescue for s2457 was to fertile adult and for s2626 to sterile adult from early larval arrest stages.
  Method: Gene