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WormBase Tree Display for Gene: WBGene00012648

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Name Class

WBGene00012648SMapS_parentSequenceY39A1A
IdentityVersion1
NameSequence_nameY39A1A.9
Molecular_nameY39A1A.9
Y39A1A.9.1
CE38117
Other_nameCELE_Y39A1A.9Accession_evidenceNDBBX284603
Public_nameY39A1A.9
DB_infoDatabaseAceViewgene3L720
WormQTLgeneWBGene00012648
WormFluxgeneWBGene00012648
NDBlocus_tagCELE_Y39A1A.9
PanthergeneCAEEL|WormBase=WBGene00012648|UniProtKB=Q9XX27
familyPTHR33861
NCBIgene176484
RefSeqproteinNM_066943.6
TREEFAMTREEFAM_IDTF313161
TrEMBLUniProtAccQ9XX27
UniProt_GCRPUniProtAccQ9XX27
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00857662
WBVar00857663
WBVar00857664
WBVar00565270
WBVar00565272
WBVar00857665
WBVar00565273
WBVar00857666
WBVar00565274
WBVar00857667
WBVar00857668
WBVar00857669
WBVar01500260
WBVar00857670
WBVar00857671
WBVar01952665
WBVar01952666
WBVar02019166
WBVar02019167
WBVar01499194
WBVar01333190
WBVar01268164
WBVar00407736
WBVar00407737
WBVar00407738
WBVar01645967
WBVar00407739
WBVar00407740
WBVar00407741
WBVar00407742
WBVar00407743
WBVar00407744
WBVar00407745
WBVar00407746
WBVar01499774
WBVar00216622
WBVar00216623
WBVar00216624
WBVar00277687
WBVar00277688
WBVar01499594
WBVar01499595
WBVar01918850
WBVar01838404
WBVar01499261
WBVar01497239
WBVar01567452
WBVar00857652
WBVar00857653
WBVar00857654
WBVar00857655
WBVar00857656
WBVar00857657
WBVar00857658
WBVar00857659
WBVar00857660
WBVar00857661
WBVar01409327
RNASeq_FPKM (74)
GO_annotation00104093
00104094
00104095
00104096
00104097
00119686
OrthologWBGene00037776Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055797Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00152232Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00180318Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00226708Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4736Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11783Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g9456Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15315Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17654Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2641Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20146Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17329Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g416Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00137.g5358Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y39A1A.9Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7329Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00508.g12253Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01669.g22415Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_010432Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04948Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15415Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30127600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8909Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207500Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245322Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00103718Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304879Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00261065Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287015Trichuris murisFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-070117-1657Danio rerioFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:26670Homo sapiensFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
MGI:2686410Mus musculusFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
RGD:1563746Rattus norvegicusFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
Structured_descriptionAutomated_descriptionPredicted to be involved in female meiosis I; mRNA stabilization; and male meiosis I. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human MEIOC (meiosis specific with coiled-coil domain).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY39A1A.9
Corresponding_CDS_historyY39A1A.9:wp139
Corresponding_transcriptY39A1A.9.1
Other_sequence (12)
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00020348Inferred_automaticallyRNAi_primary
WBRNAi00056121Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Microarray_results (19)
Expression_cluster (246)
Interaction (14)
Map_infoPositivePositive_cloneY39A1AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII4.11041
ReferenceWBPaper00038491
WBPaper00055090
MethodGene