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WormBase Tree Display for Gene: WBGene00012086

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Name Class

WBGene00012086SMapS_parentSequenceT27D12
IdentityVersion2
NameCGC_nameclec-144Person_evidenceWBPerson2531
Sequence_nameT27D12.3
Molecular_nameT27D12.3
T27D12.3.1
CE46020
Other_nameCELE_T27D12.3Accession_evidenceNDBBX284602
Public_nameclec-144
DB_infoDatabaseAceViewgene2M120
WormQTLgeneWBGene00012086
WormFluxgeneWBGene00012086
NDBlocus_tagCELE_T27D12.3
PanthergeneCAEEL|WormBase=WBGene00012086|UniProtKB=Q22831
familyPTHR23124
NCBIgene188994
RefSeqproteinNM_064127.3
TREEFAMTREEFAM_IDTF315870
TrEMBLUniProtAccQ22831
UniProt_GCRPUniProtAccQ22831
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-144
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
AlleleWBVar01312509
WBVar01499702
WBVar01547215
WBVar01498613
WBVar01605166
WBVar01498435
WBVar01627322
WBVar00379227
WBVar00379228
WBVar00379229
WBVar00259001
WBVar01499986
WBVar01538763
WBVar01538764
WBVar00771615
WBVar00229878
WBVar00771616
WBVar00771617
WBVar00771618
WBVar00771619
WBVar00771620
WBVar00771621
WBVar00771622
WBVar00771623
WBVar00052457
WBVar01498941
WBVar01440260
WBVar01414002
RNASeq_FPKM (74)
OrthologWBGene00141751Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00153774Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00153021Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146290Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00142039Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160965Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00164553Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00067419Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067427Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067417Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00161359Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00033541Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g1472Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6726Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3842Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11127Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g11128Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g776Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g9627Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g17618Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g17619Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g17620Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g761Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10109Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g11302Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g11364Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g12697Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g12999Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g13613Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15899Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15930Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15931Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16855Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16920Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16921Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4853Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4854Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4857Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4868Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4871Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4873Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4874Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5572Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5585Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8283Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8295Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8296Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8298Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9843Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16565Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g21784Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22961Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9384Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00003.g301Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00077.g3571Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00082.g3765Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00220.g7298Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00220.g7299Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10229Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10230Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10231Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10233Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10235Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00395.g10239Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00537.g11984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00537.g11985Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00537.g11986Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00537.g11989Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00537.g11990Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00600.g12654Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00739.g13805Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00754.g13895Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00951.g15090Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00951.g15092Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00951.g15093Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01142.g15807Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01530.g16501Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01545.g16516Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05041.g19306Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06908.g20558Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07011.g20629Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11387.g23209Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11682.g23374Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g2444Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20389Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00675.g14297Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_002795Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g6046Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129881Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133805Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212422Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213371Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217064Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00070944Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (126)
Structured_descriptionAutomated_descriptionEnriched in ABplpaaaaa; ABprpaaaaa; and nerve ring neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; allantoin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST27D12.3
Corresponding_CDS_historyT27D12.3:wp225
Corresponding_transcriptT27D12.3.1
Experimental_infoRNAi_resultWBRNAi00054802Inferred_automaticallyRNAi_primary
WBRNAi00019609Inferred_automaticallyRNAi_primary
WBRNAi00036030Inferred_automaticallyRNAi_primary
WBRNAi00054308Inferred_automaticallyRNAi_primary
WBRNAi00019330Inferred_automaticallyRNAi_primary
Expr_patternExpr1022597
Expr1157852
Expr2010073
Expr2028315
Microarray_results (16)
Expression_cluster (65)
Interaction (69)
Map_infoMapIIPosition4.06516Error0.003128
PositivePositive_cloneT27D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064708
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene