WormBase Tree Display for Gene: WBGene00011198

WBGene00011198 SMap: S_parent: Sequence: R10E4
  Identity: Version: 1
    Name: Sequence_name: R10E4.1
      Molecular_name: R10E4.1
        R10E4.1.1
        CE03555
        R10E4.1.2
      Other_name: CELE_R10E4.1 Accession_evidence: NDB BX284603
      Public_name: R10E4.1
    DB_info: Database: AceView gene 3F361
        WormQTL gene WBGene00011198
        WormFlux gene WBGene00011198
        NDB locus_tag CELE_R10E4.1
        Panther gene CAEEL|WormBase=WBGene00011198|UniProtKB=Q21899
          family PTHR22744
        NCBI gene 175550
        RefSeq protein NM_065453.8
        TREEFAM TREEFAM_ID TF319249
        TrEMBL UniProtAcc Q21899
        UniProt_GCRP UniProtAcc Q21899
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar02012953
      WBVar00820854
      WBVar00820855
      WBVar00820856
      WBVar00820857
      WBVar01994968
      WBVar00820858
      WBVar00820859
      WBVar00820860
      WBVar00820861
      WBVar00820862
      WBVar00820863
      WBVar00820864
      WBVar00820865
      WBVar00820866
      WBVar00820867
      WBVar00820868
      WBVar01262909
      WBVar01262910
      WBVar02073248
      WBVar02067479
      WBVar01823276
      WBVar01952135
      WBVar01893176
      WBVar01983886
      WBVar01607003
      WBVar00395703
      WBVar00395704
      WBVar01330320
    RNASeq_FPKM (74)
    Ortholog: WBGene00033267 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064128 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00159716 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130399 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222201 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9418 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8039 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5346 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1316 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11069 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g12651 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g3788 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2514 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15088 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8715 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21342 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00246.g7812 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00443.g10913 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12570 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_06209.g36227 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07959 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009185 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g2692 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30032200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30046500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30116900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7408 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247035 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00097527 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00256306 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (25)
    Structured_description: Automated_description: Enriched in excretory cell; germ line; intestine; and neurons based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by nine chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R10E4.1
    Corresponding_transcript: R10E4.1.1
      R10E4.1.2
    Other_sequence: CR08465
      CRC08636_1
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00017706 Inferred_automatically: RNAi_primary
      WBRNAi00005025 Inferred_automatically: RNAi_primary
      WBRNAi00051706 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026234
      Expr1034917
      Expr1155377
      Expr2005551
      Expr2023770
    Drives_construct: WBCnstr00030852
    Construct_product: WBCnstr00030852
    Microarray_results (22)
    Expression_cluster (141)
    Interaction (52)
  Map_info: Positive: Positive_clone: R10E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -3.29281
  Method: Gene