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WormBase Tree Display for Gene: WBGene00011097

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Name Class

WBGene00011097SMapS_parentSequenceR07B7
IdentityVersion2
NameCGC_namenhr-206Person_evidenceWBPerson600
Sequence_nameR07B7.13
Molecular_nameR07B7.13a
R07B7.13a.1
CE06275
R07B7.13b
CE48399
R07B7.13b.1
Other_nameCELE_R07B7.13Accession_evidenceNDBBX284605
Public_namenhr-206
DB_infoDatabaseAceViewgene5M573
WormQTLgeneWBGene00011097
WormFluxgeneWBGene00011097
NDBlocus_tagCELE_R07B7.13
PanthergeneCAEEL|WormBase=WBGene00011097|UniProtKB=Q21803
familyPTHR24083
NCBIgene187660
RefSeqproteinNM_001307750.3
NM_073632.6
TrEMBLUniProtAccQ21803
N1NTC6
UniProt_GCRPUniProtAccQ21803
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-206
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar01499547
WBVar01678091
WBVar01499970
WBVar00006570
WBVar01848391
WBVar00145968
WBVar01500212
WBVar01500213
WBVar01499299
WBVar01052820
WBVar00472058
WBVar01052821
WBVar00472059
WBVar01052822
WBVar00472060
WBVar00472061
WBVar01052823
WBVar00472062
WBVar01052824
WBVar01052825
WBVar01052826
WBVar01052827
WBVar01052828
WBVar01052829
WBVar01866676
WBVar01499316
WBVar01866677
WBVar01052830
WBVar01866678
WBVar01808631
WBVar01808632
StrainWBStrain00036547
RNASeq_FPKM (74)
GO_annotation (15)
OrthologWBGene00150277Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00052425Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00222339Brugia malayiFrom_analysisWormBase-Compara
WBGene00224250Brugia malayiFrom_analysisWormBase-Compara
WBGene00224690Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g1793Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g21020Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12063Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19531Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19000Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g865Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g867Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26125Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26126Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26280Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26281Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13900Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8588Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5953Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17311Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20381Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g21682Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9225Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00188.g6590Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10360Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00567.g12974Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_018184Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g19451Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23149Panagrellus redivivusFrom_analysisWormBase-Compara
chrV_pilon.g15922Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237444Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239244Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241769Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244924Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267740Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288423Trichuris murisFrom_analysisWormBase-Compara
WBGene00292803Trichuris murisFrom_analysisWormBase-Compara
WBGene00301850Trichuris murisFrom_analysisWormBase-Compara
WBGene00301886Trichuris murisFrom_analysisWormBase-Compara
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. Expressed in several structures, including anal sphincter muscle; hyp12; rectal gland cell; tail hypodermis; and vulva.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR07B7.13a
R07B7.13b
Corresponding_transcriptR07B7.13a.1
R07B7.13b.1
Associated_featureWBsf647327
WBsf661854
WBsf978838
WBsf232596
Transcription_factorWBTranscriptionFactor000906
Experimental_infoRNAi_resultWBRNAi00110166Inferred_automaticallyRNAi_primary
WBRNAi00070102Inferred_automaticallyRNAi_primary
WBRNAi00110159Inferred_automaticallyRNAi_primary
WBRNAi00051430Inferred_automaticallyRNAi_primary
WBRNAi00051431Inferred_automaticallyRNAi_primary
WBRNAi00110174Inferred_automaticallyRNAi_primary
WBRNAi00110152Inferred_automaticallyRNAi_primary
WBRNAi00110172Inferred_automaticallyRNAi_primary
WBRNAi00017516Inferred_automaticallyRNAi_primary
Expr_patternExpr7633
Expr9030
Expr9039
Expr1019675
Expr1034873
Expr1155119
Expr2014109
Expr2032348
Drives_constructWBCnstr00012778
WBCnstr00013684
WBCnstr00030935
Construct_productWBCnstr00030935
Microarray_results (21)
Expression_cluster (163)
SAGE_tagSAGE:tggctactaaStrandAntisense
SAGE:gattattcatStrandSense
Unambiguously_mapped
InteractionWBInteraction000192780
WBInteraction000226599
WBInteraction000231492
WBInteraction000272849
WBInteraction000360272
WBInteraction000363413
WBInteraction000383455
WBInteraction000386921
WBInteraction000426767
WBInteraction000444792
Map_infoMapVPosition3.62984Error0.001344
PositivePositive_cloneR07B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00034540
WBPaper00036257
WBPaper00039677
WBPaper00060760
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene