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WormBase Tree Display for Gene: WBGene00009394

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Name Class

WBGene00009394SMapS_parentSequenceF35C5
IdentityVersion2
NameCGC_nameclec-63Person_evidenceWBPerson261
WBPerson655
Sequence_nameF35C5.6
Molecular_nameF35C5.6
F35C5.6.1
CE15947
Other_nameCELE_F35C5.6Accession_evidenceNDBBX284602
Public_nameclec-63
DB_infoDatabaseAceViewgene2N187
WormQTLgeneWBGene00009394
WormFluxgeneWBGene00009394
NDBlocus_tagCELE_F35C5.6
PanthergeneCAEEL|WormBase=WBGene00009394|UniProtKB=O45444
familyPTHR31024
NCBIgene174927
RefSeqproteinNM_064342.7
TREEFAMTREEFAM_IDTF317104
TrEMBLUniProtAccO45444
UniProt_GCRPUniProtAccO45444
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-63
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
AlleleWBVar01560508
WBVar01560509
WBVar01560510
WBVar01499702
WBVar01560511
WBVar01560512
WBVar01560513
WBVar01499338
WBVar01499339
WBVar02152544
WBVar01498435
WBVar02151098
WBVar01498828
WBVar02087522
WBVar01498829
WBVar01720898
WBVar01836677
WBVar00093764
WBVar00002953
WBVar00235004
WBVar01539345
WBVar00778462
WBVar00002958
WBVar00778463
WBVar00778464
WBVar00778465
WBVar00778466
WBVar00778467
WBVar00778468
WBVar00381522
WBVar00778469
WBVar00381523
WBVar00381524
WBVar00778470
WBVar00381525
WBVar00778471
WBVar00778472
WBVar00778473
WBVar00778474
WBVar00778475
WBVar00778476
WBVar00778477
WBVar01949560
WBVar00778478
WBVar01498941
WBVar00778479
WBVar00778480
WBVar00778481
WBVar00778482
WBVar00778483
WBVar00778484
WBVar01560491
WBVar00778485
WBVar01560492
WBVar01560493
WBVar01560494
WBVar01560495
WBVar01560496
WBVar01560497
WBVar01560498
WBVar01560499
WBVar01560500
WBVar01560501
WBVar01560502
WBVar01560503
WBVar01560504
WBVar01560505
WBVar01560506
WBVar01560507
StrainWBStrain00032688
RNASeq_FPKM (74)
OrthologWBGene00026985Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00069848Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00160560Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00097188Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00134247Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00109123Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00098882Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00093171Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111723Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00092267Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00110964Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108103Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00103848Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111777Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108491Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111481Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111718Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g7663Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7664Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7666Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7667Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4686Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g382Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8051Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20042Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14927Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4968Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g7058Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3167Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00027.g1645Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5080Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold492.g2144Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01499.g21298Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08661Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003831Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01378Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04676Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08072Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12105Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12107Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11472Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18412Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18481Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2155Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23296Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g6278Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00095459Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096168Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115326Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00283764Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259015Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263770Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267716Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (13)
Structured_descriptionAutomated_descriptionExpressed in germ line and intestine. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35C5.6
Corresponding_transcriptF35C5.6.1
Other_sequence (22)
Associated_featureWBsf644774
WBsf222303
WBsf222304
Experimental_infoRNAi_resultWBRNAi00014305Inferred_automaticallyRNAi_primary
WBRNAi00090590Inferred_automaticallyRNAi_primary
WBRNAi00092252Inferred_automaticallyRNAi_primary
WBRNAi00089359Inferred_automaticallyRNAi_primary
WBRNAi00031761Inferred_automaticallyRNAi_primary
WBRNAi00046304Inferred_automaticallyRNAi_primary
WBRNAi00075938Inferred_automaticallyRNAi_primary
WBRNAi00089351Inferred_automaticallyRNAi_primary
Expr_patternExpr1003
Expr1005
Expr1024330
Expr1034113
Expr1150192
Expr2010196
Expr2028438
Drives_constructWBCnstr00032223
Construct_productWBCnstr00032223
Microarray_results (27)
Expression_cluster (280)
Interaction (139)
WBProcessWBbiopr:00000039
Map_infoMapIIPosition12.3104Error0.031034
PositivePositive_cloneF35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00030985
WBPaper00031686
WBPaper00037541
WBPaper00041339
WBPaper00058665
WBPaper00059481
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene