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WormBase Tree Display for Gene: WBGene00009233

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Name Class

WBGene00009233SMapS_parentSequenceF28H6
IdentityVersion1
NameSequence_nameF28H6.4
Molecular_nameF28H6.4
F28H6.4.1
CE23688
Other_nameCELE_F28H6.4Accession_evidenceNDBBX284606
Public_nameF28H6.4
DB_infoDatabaseAceViewgeneXO751
WormQTLgeneWBGene00009233
WormFluxgeneWBGene00009233
NDBlocus_tagCELE_F28H6.4
PanthergeneCAEEL|WormBase=WBGene00009233|UniProtKB=Q9U3H5
familyPTHR23362
NCBIgene181522
RefSeqproteinNM_077953.6
TREEFAMTREEFAM_IDTF322681
TrEMBLUniProtAccQ9U3H5
UniProt_GCRPUniProtAccQ9U3H5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01500067
WBVar01499887
WBVar01499519
WBVar01499888
WBVar01493816
WBVar01499710
WBVar01782611
WBVar02027620
WBVar00084593
WBVar01552595
WBVar00084594
WBVar00084595
WBVar01552596
WBVar01552597
WBVar01552598
WBVar01552599
WBVar01552600
WBVar01552601
WBVar01552602
WBVar01552603
WBVar01552604
WBVar01832131
WBVar02072678
WBVar01760125
WBVar01760126
WBVar01760127
WBVar01760128
WBVar01941918
WBVar01946265
WBVar01946266
WBVar01946267
WBVar01679390
WBVar00217953
WBVar00217954
WBVar02015633
WBVar01527859
WBVar01787887
WBVar01206231
WBVar01206232
WBVar01472352
WBVar01206233
WBVar01472353
WBVar01206234
WBVar01472354
WBVar01206235
WBVar01206236
WBVar01472355
WBVar01206237
WBVar01206238
WBVar01206239
WBVar01206240
WBVar01206241
WBVar01206242
WBVar00523533
WBVar01206243
WBVar00523534
WBVar00523535
WBVar01206244
WBVar01206245
WBVar00523536
WBVar01206246
WBVar02049215
WBVar00523537
WBVar01206247
WBVar00523538
WBVar01206248
WBVar01206249
WBVar01206250
WBVar01206251
WBVar01206252
WBVar01206253
WBVar01206254
WBVar01206255
WBVar01704000
WBVar01206256
WBVar01206257
WBVar01206258
WBVar01206259
WBVar01622075
WBVar01206260
WBVar01206261
WBVar01206262
WBVar01206263
WBVar01206264
WBVar01206265
WBVar01206267
WBVar01206268
WBVar01206269
WBVar01206270
WBVar01206271
WBVar01206272
WBVar01488065
WBVar01955183
WBVar01835793
WBVar01498960
RNASeq_FPKM (74)
OrthologWBGene00120878Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00071369Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00144870Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00071067Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00066169Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00039195Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00217884Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00150291Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP26.g18931Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP32.g1938Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g4723Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g689Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8101Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP40.g11906Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_III.g8855Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold479.g1815Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7104Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_10601Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_14661Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011133Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011134Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011141Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025920Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0111300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20525Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135405Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00211140Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00071370Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079713Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (37)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalppppppp; OLL; RIM; germ line; and interneuron based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; nuo-6; and ptl-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by nine chemicals including D-glucose; stavudine; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain; Homeobox-like domain superfamily; Domain of unknown function (DUF545); and Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSF28H6.4
Corresponding_transcriptF28H6.4.1
Associated_feature (4)
Experimental_infoRNAi_resultWBRNAi00001139Inferred_automaticallyRNAi_primary
WBRNAi00031549Inferred_automaticallyRNAi_primary
WBRNAi00014076Inferred_automaticallyRNAi_primary
WBRNAi00014075Inferred_automaticallyRNAi_primary
WBRNAi00045874Inferred_automaticallyRNAi_primary
Expr_patternExpr1026992
Expr1034030
Expr1149777
Expr2003121
Expr2021335
Drives_constructWBCnstr00032354
Construct_productWBCnstr00032354
Microarray_results (21)
Expression_cluster (146)
Interaction (11)
Map_infoPositivePositive_cloneF28H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX16.5096
MethodGene