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WormBase Tree Display for Gene: WBGene00007623

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Name Class

WBGene00007623SMapS_parentSequenceC16C10
IdentityVersion1
NameSequence_nameC16C10.2
Molecular_nameC16C10.2
C16C10.2.1
CE01493
Other_nameCELE_C16C10.2Accession_evidenceNDBBX284603
Public_nameC16C10.2
DB_infoDatabaseAceViewgene3F268
WormQTLgeneWBGene00007623
WormFluxgeneWBGene00007623
NDBlocus_tagCELE_C16C10.2
PanthergeneCAEEL|WormBase=WBGene00007623|UniProtKB=Q09462
familyPTHR12838
NCBIgene175536
RefSeqproteinNM_065434.7
SwissProtUniProtAccQ09462
TREEFAMTREEFAM_IDTF314171
UniProt_GCRPUniProtAccQ09462
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar02131852
WBVar00820322
WBVar00820323
WBVar00820324
WBVar00820325
WBVar00820326
WBVar00820327
WBVar00820328
WBVar00820329
WBVar00820330
WBVar00820331
WBVar00820332
WBVar00820333
WBVar00820334
WBVar01667435
WBVar02156388
WBVar00395539
RNASeq_FPKM (74)
GO_annotation00054053
00054054
00054055
00054056
00054057
00054058
00115722
00115723
Contained_in_operonCEOP3160
OrthologWBGene00071142Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039212Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00154591Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00091300Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00137861Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00234295Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4547Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9570Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16211Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5383Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1355Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13344Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3955Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3793Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2652Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9834Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00346.g9538Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C16C10.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11511Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00589.g13231Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07291Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008930Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08568Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21350Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30028310Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7388Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244679Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263522Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293474Trichuris murisFrom_analysisWormBase-Compara
SGD:S000001582Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
FB:FBgn0030063Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-8093Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:24329Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1914455Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:621412Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to be involved in translation. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human UTP11 (UTP11 small subunit processome component).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16C10.2
Corresponding_transcriptC16C10.2.1
Other_sequence (36)
Associated_featureWBsf226484
WBsf226485
WBsf226486
Experimental_infoRNAi_result (17)
Expr_patternExpr1011251
Expr1033289
Expr1144724
Expr2000851
Expr2019068
Drives_constructWBCnstr00033600
Construct_productWBCnstr00033600
Microarray_results (23)
Expression_cluster (106)
Interaction (166)
Map_infoPositivePositive_cloneC16C10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-3.71156
ReferenceWBPaper00024200
WBPaper00038491
WBPaper00041771
WBPaper00055090
MethodGene