Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00000212

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00000212EvidencePaper_evidenceWBPaper00003086
SMapS_parentSequenceZK455
IdentityVersion1
NameCGC_nameasm-2Person_evidenceWBPerson250
Sequence_nameZK455.4
Molecular_nameZK455.4
ZK455.4.1
CE31674
Other_nameCELE_ZK455.4Accession_evidenceNDBBX284606
Public_nameasm-2
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classasm
AlleleWBVar00091495
WBVar01499887
WBVar01499888
WBVar00517171
WBVar00517172
WBVar00517173
WBVar01499710
WBVar00517174
WBVar00517175
WBVar00517176
WBVar00517177
WBVar01849571
WBVar00068040
WBVar00068045
WBVar01690433
WBVar01690434
WBVar01690435
WBVar00068050
WBVar00083105
WBVar00083106
WBVar00599177
WBVar00252354
WBVar01620561
WBVar01620562
WBVar01187072
WBVar01187073
WBVar01187074
WBVar01187075
WBVar01187076
WBVar01187077
WBVar01187078
WBVar01187079
WBVar01187080
WBVar01187081
WBVar01187082
WBVar01187083
WBVar01187084
WBVar01187085
WBVar01187086
WBVar01845983
WBVar01187087
WBVar01187088
WBVar01187089
WBVar01187090
WBVar01187091
WBVar01187092
WBVar01498919
WBVar01498920
WBVar01498960
WBVar01500067
RNASeq_FPKM (74)
GO_annotation (28)
OrthologWBGene00058305Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00037012Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00190086Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00133303Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00098372Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00098375Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00221985Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3552Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10892Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11889Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7236Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18756Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15834Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21797Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2849Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18702Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28792Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12636Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00373.g9935Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-asm-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold450.g1288Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00297.g8926Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01135Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023773Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_023774Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04042Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14058Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15272Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0087110Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20053Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248445Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00095490Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264528Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264529Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264535Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0034997Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-110411-222Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:11120Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:98325Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1549719Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000211Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000213Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014106Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionasm-2 encodes a protein similar to human acid sphingomyelinase (ASM) or sphingomyelin phosphodiesterase 1; the ASM-2 protein has a putative secretory signal peptide at the N-terminus, saposin-like and proline-rich domains and putative N-linked glycosylation sites; asm-2 shows phosphodiesterase activity when expressed in COS-7 cells; like mammalian ASM, asm-2 is probably both intracellular and secreted; northern blot analysis indicates that asm-2 is expressed during post-embryonic development as compared to asm-1 which is expressed at higher levels in the embryo; human ASM is implicated in Niemann-Pick disease type B (OMIM:607608).Paper_evidenceWBPaper00003086
Curator_confirmedWBPerson324
WBPerson1823
WBPerson567
Date_last_updated09 Aug 2006 00:00:00
Automated_descriptionEnables sphingomyelin phosphodiesterase activity. Involved in ceramide biosynthetic process and sphingomyelin catabolic process. Located in extracellular region. Human ortholog(s) of this gene implicated in Niemann-Pick disease type A and Niemann-Pick disease type B. Is an ortholog of human SMPD1 (sphingomyelin phosphodiesterase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:14504Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11120)
DOID:0070112Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11120)
DOID:0070111Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11120)
Molecular_infoCorresponding_CDSZK455.4
Corresponding_CDS_historyZK455.4:wp83
Corresponding_transcriptZK455.4.1
Other_sequence (32)
Associated_featureWBsf654409
WBsf237956
Experimental_infoRNAi_resultWBRNAi00038298Inferred_automaticallyRNAi_primary
WBRNAi00059434Inferred_automaticallyRNAi_primary
WBRNAi00000331Inferred_automaticallyRNAi_primary
Expr_patternExpr1013294
Expr1162861
Expr2009455
Expr2027692
Drives_constructWBCnstr00037660
Construct_productWBCnstr00037660
AntibodyWBAntibody00001822
Microarray_results (18)
Expression_cluster (207)
InteractionWBInteraction000133965
WBInteraction000177307
WBInteraction000290792
Map_infoMapXPosition2.95988Error0.006229
PositivePositive_cloneZK455Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene