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WormBase Tree Display for Gene: WBGene00021074

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Name Class

WBGene00021074SMapS_parentSequenceW07E6
IdentityVersion2
NameCGC_namegldi-1Person_evidenceWBPerson6609
WBPerson1816
Sequence_nameW07E6.2
Molecular_nameW07E6.2a
W07E6.2a.1
CE17294
W07E6.2b
CE51055
W07E6.2b.1
Other_nameCELE_W07E6.2Accession_evidenceNDBBX284602
Public_namegldi-1
DB_infoDatabaseAceViewgene2A772
WormQTLgeneWBGene00021074
SignaLinkproteinWBGene00021074
WormFluxgeneWBGene00021074
NDBlocus_tagCELE_W07E6.2
PanthergeneCAEEL|WormBase=WBGene00021074|UniProtKB=Q9TYV3
familyPTHR19848
NCBIgene173439
RefSeqproteinNM_001316868.3
NM_061344.5
TrEMBLUniProtAccQ9TYV3
A0A0M9JJ65
UniProt_GCRPUniProtAccQ9TYV3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
205 May 2023 12:43:53WBPerson51134Name_changeCGC_namegldi-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgldi
AlleleWBVar01499702
WBVar01237529
WBVar01237540
WBVar01291863
WBVar01291864
WBVar01291867
WBVar01291869
WBVar01291870
WBVar01500106
WBVar00354920
WBVar00354921
WBVar00354922
WBVar00354923
WBVar00354924
WBVar00250484
WBVar00354925
WBVar00354926
WBVar00354927
WBVar00354928
WBVar01435403
WBVar01435404
WBVar01623108
WBVar01623109
WBVar00095726
WBVar01623110
WBVar02039931
WBVar02039932
WBVar02039933
WBVar00163116
WBVar00163118
WBVar00163120
WBVar00163121
WBVar00163124
WBVar00009651
WBVar00163125
WBVar00163126
WBVar00009656
WBVar02098991
WBVar00009661
WBVar00009666
WBVar00009671
WBVar00699030
WBVar01932898
WBVar00699031
WBVar00699032
WBVar00543710
WBVar00699033
WBVar00699034
WBVar00699035
WBVar00699036
WBVar00699037
WBVar00699038
WBVar00699039
WBVar00699040
WBVar00699041
WBVar00699042
WBVar00699043
WBVar00699044
WBVar01988612
RNASeq_FPKM (74)
GO_annotation00001779
00001780
00097677
00097678
00097679
OrthologWBGene00029232Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00161511Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00064193Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00130823Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00233947Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7750Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9320Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8434Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18282Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17549Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25735Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g912Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21373Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7997Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22608Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00290.g8598Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-W07E6.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5662Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02260.g25674Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15718Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_007978Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13588Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7166Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20000600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g3123Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00078430Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00078434Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00255520Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304260Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304269Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263885Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286107Trichuris murisFrom_analysisWormBase-Compara
SGD:S000000668Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0021874Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050522-321Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:19889Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2429770Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1308301Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionW07E6.2 encodes an ortholog of S. cerevisiae RSA4 that may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, W07E6.2 is probably required for ribosome biogenesis, suggesting a link between biogenesis in the distal sheath and control of cell division in the germ line.Paper_evidenceWBPaper00028280
WBPaper00028933
Curator_confirmedWBPerson567
Date_last_updated23 Apr 2008 00:00:00
Automated_descriptionPredicted to be involved in Notch signaling pathway. Predicted to be located in nucleolus. Is an ortholog of human NLE1 (notchless homolog 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW07E6.2a
W07E6.2b
Corresponding_transcriptW07E6.2a.1
W07E6.2b.1
Other_sequenceDviv_isotig14278
JI459436.1
FC812727.1
JI170447.1
HBC04512_1
ACC36896_1
MI05610
MIC05873_1
SS02634
XIC05588_1
EX548220.1
CR06155
FC819474.1
MIC07607_1
CRC00868_1
HCC07130_1
MJ02888
FC812173.1
JI463669.1
BUC01794_1
Tcol_isotig14089
MAC00103_1
FC812159.1
XI04938
Dviv_isotig24766
SSC05893_1
HC05474
FC817787.1
Acan_isotig11373
AI539874.1
DN152734.1
Hbac_isotig02147
FC817771.1
MCC05722_1
GP01183
Dviv_isotig14280
GP02963
Tcir_isotig07559
MA00671
MC04824
FC819978.1
FC813612.1
OVC02784_1
Dviv_isotig29198
OF01284
GPC00636_1
BMC10039_1
FC818394.1
OFC00395_1
Tcol_isotig19877
Oden_isotig12411
SRC04038_1
Oden_isotig12410
SR00656
MIC04747_1
Associated_featureWBsf649825
WBsf665327
WBsf665328
WBsf986418
WBsf1011400
WBsf222609
WBsf222610
Experimental_infoRNAi_result (15)
Expr_patternExpr1021160
Expr1039193
Expr1158484
Expr2006840
Expr2025065
Microarray_results (18)
Expression_cluster (122)
Interaction (147)
Map_infoMapIIPosition-15.6026
PositivePositive_cloneW07E6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028280
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene