WormBase Tree Display for Gene: WBGene00019268

WBGene00019268 SMap: S_parent: Sequence: H41C03
  Identity: Version: 1
    Name: Sequence_name: H41C03.1
      Molecular_name: H41C03.1
        H41C03.1.1
        CE19507
      Other_name: CELE_H41C03.1 Accession_evidence: NDB BX284602
      Public_name: H41C03.1
    DB_info: Database: AceView gene 2G147
        WormQTL gene WBGene00019268
        WormFlux gene WBGene00019268
        NDB locus_tag CELE_H41C03.1
        Panther gene CAEEL|WormBase=WBGene00019268|UniProtKB=O76636
          family PTHR47159
        NCBI gene 173994
        RefSeq protein NM_062767.5
        TREEFAM TREEFAM_ID TF313988
        TrEMBL UniProtAcc O76636
        UniProt_GCRP UniProtAcc O76636
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00367020
      WBVar00367021
      WBVar01499702
      WBVar01498435
      WBVar01373400
      WBVar01719957
      WBVar01500128
      WBVar00103952
      WBVar01437981
      WBVar01437982
      WBVar01437983
      WBVar01306494
      WBVar01306496
      WBVar01306498
      WBVar01306499
      WBVar01306500
      WBVar01306501
      WBVar01306502
      WBVar01306503
      WBVar01306505
      WBVar00734543
      WBVar00734544
      WBVar00734545
      WBVar00734546
      WBVar00734547
      WBVar00734548
      WBVar00734549
      WBVar00734550
      WBVar00734551
      WBVar00734552
      WBVar00734553
      WBVar00734554
      WBVar00734555
      WBVar00734556
      WBVar00734557
      WBVar00734558
      WBVar00734559
      WBVar00734560
      WBVar00734561
      WBVar00734562
      WBVar00734563
      WBVar00734564
      WBVar00734565
      WBVar00734566
      WBVar00734567
      WBVar00734568
      WBVar00734569
      WBVar00734570
      WBVar01934754
      WBVar00734571
      WBVar00734572
      WBVar00265304
      WBVar00172295
      WBVar00172296
      WBVar00265306
      WBVar00172298
      WBVar00172299
      WBVar00265307
      WBVar00172300
      WBVar00172301
      WBVar00250221
      WBVar02148200
      WBVar00598368
      WBVar00598369
      WBVar00598370
      WBVar00598371
      WBVar00367015
      WBVar00367016
      WBVar00367017
      WBVar00367018
      WBVar00367019
      WBVar00261488
    RNASeq_FPKM (74)
    Ortholog (26)
    Paralog (11)
    Structured_description: Automated_description: Enriched in several structures, including ABarpaapap; ABarpaappa; anterior hypodermis; mechanosensory neurons; and rectal epithelial cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including bisphenol A; TPEN; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: CRAL/TRIO domain; CRAL-TRIO lipid binding domain; CRAL/TRIO, N-terminal domain superfamily; and CRAL-TRIO lipid binding domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H41C03.1
    Corresponding_transcript: H41C03.1.1
    Other_sequence (60)
    Associated_feature: WBsf654868
      WBsf1012269
      WBsf221353
      WBsf221354
  Experimental_info: RNAi_result (13)
    Expr_pattern (5)
    Drives_construct: WBCnstr00025955
    Construct_product: WBCnstr00025955
    Microarray_results: SMD_H41C03.1
      185591_at
      A_12_P108583
      Aff_H41C03.1
      GPL13394_WBGene00019268
      GPL13914_H41C03.1
      GPL14144_H41C03.1_1088-1147_0.962_1_A
      GPL14144_H41C03.1_766-825_0.927_11_C
      GPL14144_H41C03.1_879-938_0.941_7_B
      GPL19516_CGZ0027026
      GPL21109_H41C03.1
      GPL3518_CE19507
      GPL8304_CE_WBGene00019268_A
      GPL8304_CE_WBGene00019268_B
      GPL8673_H41C03_1P00466
      GPL8673_H41C03_1P00801
      GPL8673_H41C03_1P01041
      GPL9450_H41C03.1
      cea2.p.41971
    Expression_cluster (152)
    Interaction: WBInteraction000276408
      WBInteraction000310119
      WBInteraction000357866
      WBInteraction000406747
      WBInteraction000454178
      WBInteraction000552687
      WBInteraction000553652
      WBInteraction000568093
  Map_info: Positive: Positive_clone: H41C03 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -0.863782
  Reference: WBPaper00055090
  Method: Gene