WormBase Tree Display for Gene: WBGene00016259
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| WBGene00016259 | SMap | S_parent | Sequence | C30F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C30F8.3 | |||||||
| Molecular_name | C30F8.3 | ||||||||
| C30F8.3.1 | |||||||||
| CE44727 | |||||||||
| Other_name | C30F8.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C30F8.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | C30F8.3 | ||||||||
| DB_info | Database | AceView | gene | 1F665 | |||||
| WormQTL | gene | WBGene00016259 | |||||||
| WormFlux | gene | WBGene00016259 | |||||||
| NDB | locus_tag | CELE_C30F8.3 | |||||||
| NCBI | gene | 172136 | |||||||
| RefSeq | protein | NM_059116.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322035 | |||||||
| TrEMBL | UniProtAcc | Q95YD3 | |||||||
| UniProt_GCRP | UniProtAcc | Q95YD3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00636083 | ||||||||
| WBVar00636084 | |||||||||
| WBVar00636085 | |||||||||
| WBVar00636086 | |||||||||
| WBVar00636087 | |||||||||
| WBVar00636088 | |||||||||
| WBVar00636089 | |||||||||
| WBVar00636090 | |||||||||
| WBVar00636091 | |||||||||
| WBVar00636092 | |||||||||
| WBVar00636093 | |||||||||
| WBVar00636094 | |||||||||
| WBVar00636095 | |||||||||
| WBVar00636096 | |||||||||
| WBVar00636097 | |||||||||
| WBVar00636098 | |||||||||
| WBVar01282684 | |||||||||
| WBVar00636099 | |||||||||
| WBVar00636100 | |||||||||
| WBVar00636101 | |||||||||
| WBVar00636102 | |||||||||
| WBVar00636103 | |||||||||
| WBVar00636104 | |||||||||
| WBVar00636105 | |||||||||
| WBVar00636106 | |||||||||
| WBVar00636107 | |||||||||
| WBVar00636108 | |||||||||
| WBVar00636109 | |||||||||
| WBVar00636110 | |||||||||
| WBVar00094262 | |||||||||
| WBVar00333764 | |||||||||
| WBVar00333765 | |||||||||
| WBVar00333766 | |||||||||
| WBVar00333767 | |||||||||
| WBVar00333768 | |||||||||
| WBVar00333769 | |||||||||
| WBVar00333770 | |||||||||
| WBVar00333771 | |||||||||
| WBVar00333772 | |||||||||
| WBVar00333773 | |||||||||
| WBVar00333774 | |||||||||
| WBVar01499786 | |||||||||
| WBVar00145916 | |||||||||
| WBVar01495004 | |||||||||
| WBVar02127314 | |||||||||
| WBVar01556389 | |||||||||
| WBVar01911712 | |||||||||
| WBVar01911713 | |||||||||
| WBVar01492666 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00036398 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Enriched in BDU; rectal epithelial cell; rectum; sensory neurons; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including Ethanol; methylmercuric chloride; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C30F8.3 | |||||||
| Corresponding_CDS_history | C30F8.3:wp213 | ||||||||
| Corresponding_transcript | C30F8.3.1 | ||||||||
| Associated_feature | WBsf983597 | ||||||||
| WBsf983598 | |||||||||
| WBsf983599 | |||||||||
| WBsf1009766 | |||||||||
| WBsf1009767 | |||||||||
| WBsf217618 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041557 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1020779 | ||||||||
| Expr1036954 | |||||||||
| Expr1145577 | |||||||||
| Expr2001256 | |||||||||
| Expr2019478 | |||||||||
| Drives_construct | WBCnstr00028210 | ||||||||
| Construct_product | WBCnstr00028210 | ||||||||
| Microarray_results | SMD_Y110A7A.I | ||||||||
| 176008_at | |||||||||
| A_12_P108034 | |||||||||
| GPL13394_WBGene00016259 | |||||||||
| GPL13914_C30F8.3 | |||||||||
| GPL14144_C30F8.3_327-386_0.927_2_C | |||||||||
| GPL14144_C30F8.3_512-571_0.927_4_B | |||||||||
| GPL14144_C30F8.3_765-824_0.924_6_A | |||||||||
| GPL19516_CGZ0006778 | |||||||||
| GPL21109_C30F8.3 | |||||||||
| GPL3518_CE30255 | |||||||||
| GPL8304_CE_WBGene00016259_A | |||||||||
| GPL8304_CE_WBGene00016259_B | |||||||||
| GPL8673_C30F8_3P00035 | |||||||||
| GPL8673_C30F8_3P00795 | |||||||||
| GPL9450_C30F8.3 | |||||||||
| cea2.p.02730 | |||||||||
| Expression_cluster (151) | |||||||||
| Map_info | Positive | Positive_clone | C30F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -0.416383 | |||||||
| Method | Gene |
