WormBase Tree Display for Gene: WBGene00015148

WBGene00015148 SMap: S_parent: Sequence: B0336
  Identity: Version: 2
    Name: CGC_name: hpo-28 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: B0336.11
      Molecular_name: B0336.11a
        B0336.11a.1
        CE39202
        B0336.11b
        CE52296
        B0336.11b.1
      Other_name: CELE_B0336.11 Accession_evidence: NDB BX284603
      Public_name: hpo-28
    DB_info: Database: AceView gene 3G798
        WormQTL gene WBGene00015148
        WormFlux gene WBGene00015148
        NDB locus_tag CELE_B0336.11
        Panther gene CAEEL|WormBase=WBGene00015148|UniProtKB=Q10956
          family PTHR46384
        NCBI gene 175798
        RefSeq protein NM_001392109.1
            NM_065831.6
        TREEFAM TREEFAM_ID TF351054
        TrEMBL UniProtAcc Q10956
            H2KY79
        UniProt_GCRP UniProtAcc Q10956
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-28
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele: WBVar00092552
      WBVar01263840
      WBVar00278371
      WBVar00398491
      WBVar01500260
      WBVar00398492
      WBVar00398493
      WBVar00398494
      WBVar00398495
      WBVar00253038
      WBVar00601092
      WBVar01500122
      WBVar01500123
      WBVar00146278
      WBVar00829238
      WBVar00829239
      WBVar00829240
      WBVar00829241
      WBVar00829242
      WBVar00829243
      WBVar00829244
      WBVar00829245
      WBVar00829246
      WBVar00829247
      WBVar00061422
      WBVar00061427
      WBVar01710112
      WBVar01445871
      WBVar01445874
      WBVar01445875
      WBVar01479800
      WBVar00563425
      WBVar01263837
    Strain: WBStrain00037323
      WBStrain00037341
      WBStrain00037365
    RNASeq_FPKM (74)
    GO_annotation: 00021400
      00021401
      00021402
      00021403
    Ortholog (35)
    Structured_description: Automated_description: Predicted to be located in endomembrane system and endoplasmic reticulum-endosome membrane contact site. Is an ortholog of human MOSPD2 (motile sperm domain containing 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0336.11a
      B0336.11b
    Corresponding_CDS_history: B0336.11a:wp150
      B0336.11b:wp261
    Corresponding_transcript: B0336.11a.1
      B0336.11b.1
    Other_sequence (29)
    Associated_feature: WBsf651073
      WBsf666459
      WBsf666919
      WBsf666920
      WBsf666921
      WBsf666922
      WBsf992495
      WBsf226722
  Experimental_info: RNAi_result (7)
    Expr_pattern: Expr1026152
      Expr1036481
      Expr1143121
      Expr2012567
      Expr2030804
    Drives_construct: WBCnstr00029050
    Construct_product: WBCnstr00029050
    Microarray_results: SMD_B0336.11
      185243_at
      A_12_P106464
      A_12_P117237
      Aff_B0336.11
      GPL13394_WBGene00015148
      GPL13914_B0336.11
      GPL14144_B0336.11a_1237-1296_0.908_21_B
      GPL14144_B0336.11a_1600-1659_0.940_4_C
      GPL14144_B0336.11a_990-1049_0.916_18_A
      GPL19516_CGZ0000783
      GPL19516_CGZ0000784
      GPL21109_B0336.11a
      GPL21109_B0336.11b
      GPL8304_CE_WBGene00015148_A
      GPL8673_B0336_11aP00726
      GPL8673_B0336_11aP01028
      GPL8673_B0336_11aP01582
      GPL8673_B0336_11bP00165
      GPL8673_B0336_11bP00259
      GPL8673_B0336_11bP00601
      GPL9450_B0336.11a
      GPL9450_B0336.11b
      cea2.d.00164
      cea2.p.55042
    Expression_cluster (158)
    Interaction (61)
  Map_info: Map: III Position: -1.44867 Error: 0.000585
    Positive: Positive_clone: B0336 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034662
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene