WormBase Tree Display for Gene: WBGene00013997

WBGene00013997 SMap: S_parent: Sequence: ZK550
  Identity: Version: 2
    Name: CGC_name: eelo-2 Person_evidence: WBPerson6609
            WBPerson1816
      Sequence_name: ZK550.3
      Molecular_name: ZK550.3
        ZK550.3.1
        CE37464
      Other_name: CELE_ZK550.3 Accession_evidence: NDB BX284604
      Public_name: eelo-2
    DB_info: Database: AceView gene 4S197
        WormQTL gene WBGene00013997
        WormFlux gene WBGene00013997
        NDB locus_tag CELE_ZK550.3
        Panther gene CAEEL|WormBase=WBGene00013997|UniProtKB=O62512
          family PTHR11804
        NCBI gene 178501
        RefSeq protein NM_070658.8
        TREEFAM TREEFAM_ID TF351383
        TrEMBL UniProtAcc O62512
        UniProt_GCRP UniProtAcc O62512
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 May 2023 12:43:53 WBPerson51134 Name_change: CGC_name: eelo-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eelo
    Allele: WBVar01807358
      WBVar01807359
      WBVar02121896
      WBVar02121897
      WBVar01499527
      WBVar02038714
      WBVar02038715
      WBVar02038716
      WBVar01457088
      WBVar01457089
      WBVar02004147
      WBVar02004148
      WBVar02004149
      WBVar02004150
      WBVar02124494
      WBVar02004151
      WBVar02004152
      WBVar01498996
      WBVar01498262
      WBVar00200273
      WBVar01499925
      WBVar00200274
      WBVar00200275
      WBVar00200276
      WBVar00200277
      WBVar01660949
      WBVar02113113
      WBVar01660950
      WBVar02113114
      WBVar02124902
      WBVar02125377
      WBVar02098037
      WBVar02117734
      WBVar01498676
      WBVar01840789
      WBVar00974864
      WBVar01483224
      WBVar01840790
      WBVar00974865
      WBVar01840791
      WBVar01570576
      WBVar01840792
      WBVar00974866
      WBVar02056253
      WBVar00974867
      WBVar00974868
      WBVar00974869
      WBVar01498687
      WBVar02123266
      WBVar00974870
      WBVar00974871
      WBVar00974872
      WBVar01970312
      WBVar00974873
      WBVar01970313
      WBVar00974874
      WBVar00974875
      WBVar00974876
      WBVar00974877
      WBVar00446238
      WBVar00974878
      WBVar00446239
      WBVar00974879
      WBVar00446240
      WBVar00974880
      WBVar00446241
      WBVar02049947
      WBVar00974881
      WBVar00446242
      WBVar01670036
      WBVar01670037
      WBVar00974882
      WBVar01799722
      WBVar00446243
      WBVar01799723
      WBVar01670038
      WBVar00974883
      WBVar00446244
      WBVar00974884
      WBVar00446245
      WBVar01670039
      WBVar01799724
      WBVar01670040
      WBVar00974885
      WBVar01799725
      WBVar01670041
      WBVar01670042
      WBVar01670043
      WBVar01670044
      WBVar01670045
      WBVar01670046
      WBVar01670047
      WBVar01498341
      WBVar02135475
      WBVar02123843
      WBVar02122008
      WBVar02123118
      WBVar02000988
      WBVar02000989
      WBVar02123695
      WBVar00579204
      WBVar01500245
      WBVar02054495
      WBVar01807357
    Strain: WBStrain00037792
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP4600
    Ortholog (37)
    Paralog: WBGene00013464 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human THOP1 (thimet oligopeptidase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK550.3
    Corresponding_CDS_history: ZK550.3:wp99
      ZK550.3:wp131
    Corresponding_transcript: ZK550.3.1
    Other_sequence (47)
    Associated_feature: WBsf646601
      WBsf660979
      WBsf229619
  Experimental_info: RNAi_result: WBRNAi00059513 Inferred_automatically: RNAi_primary
      WBRNAi00001542 Inferred_automatically: RNAi_primary
      WBRNAi00038337 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021244
      Expr1036255
      Expr1162930
      Expr2008873
      Expr2027106
    Microarray_results: SMD_ZK550.3
      179416_at
      A_12_P100777
      Aff_ZK550.3
      GPL13394_WBGene00013997
      GPL13914_ZK550.3
      GPL14144_ZK550.3_1953-2012_0.917_4_C
      GPL14144_ZK550.3_2045-2104_0.918_3_B
      GPL14144_ZK550.3_2140-2199_0.960_1_A
      GPL19516_CGZ0057034
      GPL21109_ZK550.3
      GPL3518_CE16734
      GPL8304_CE_WBGene00013997_A
      GPL8304_CE_WBGene00013997_B
      GPL8673_ZK550_3P00838
      GPL8673_ZK550_3P01364
      GPL8673_ZK550_3P01762
      GPL9450_ZK550.3
      cea2.p.105809
    Expression_cluster (109)
    Interaction (90)
  Map_info: Map: IV Position: 16.2839
    Positive: Positive_clone: ZK550 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034598
    WBPaper00036249
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene