WormBase Tree Display for Gene: WBGene00009804

WBGene00009804 SMap: S_parent: Sequence: F47B8
  Identity: Version: 1
    Name: Sequence_name: F47B8.3
      Molecular_name: F47B8.3
        F47B8.3.1
        CE10636
      Other_name: CELE_F47B8.3 Accession_evidence: NDB BX284605
      Public_name: F47B8.3
    DB_info: Database: AceView gene 5O800
        WormQTL gene WBGene00009804
        WormFlux gene WBGene00009804
        NDB locus_tag CELE_F47B8.3
        Panther gene CAEEL|WormBase=WBGene00009804|UniProtKB=Q20519
          family PTHR10293
        NCBI gene 185896
        RefSeq protein NM_074148.4
        TREEFAM TREEFAM_ID TF319019
        TrEMBL UniProtAcc Q20519
        UniProt_GCRP UniProtAcc Q20519
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01462853
      WBVar01871721
      WBVar01871722
      WBVar01590449
      WBVar01871723
      WBVar00015775
      WBVar01066739
      WBVar01066740
      WBVar01066741
      WBVar01066742
      WBVar01066743
      WBVar01066744
      WBVar01066745
      WBVar01066746
      WBVar01066747
      WBVar01499621
      WBVar01500212
      WBVar01500213
      WBVar01499293
      WBVar01499299
      WBVar02137543
      WBVar01499316
      WBVar00601213
      WBVar00476677
      WBVar00476678
      WBVar00476679
      WBVar00476680
      WBVar00476681
      WBVar00476682
      WBVar01499698
      WBVar00476683
    RNASeq_FPKM (74)
    GO_annotation: 00068346
    Ortholog: WBGene00027278 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00056918 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142995 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150802 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g19647 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1042 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11977 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g16751 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g21720 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g21722 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g30055 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4619 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g20590 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19912 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01041.g17867 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11281 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_020264 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50362300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16495 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00017062 Caenorhabditis elegans From_analysis: Panther
      WBGene00009805 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in mitochondrial matrix. Expressed in several structures, including GABAergic neurons; head muscle; head neurons; intestinal cell; and pharyngeal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F47B8.3
    Corresponding_transcript: F47B8.3.1
    Associated_feature: WBsf653375
      WBsf234935
  Experimental_info: RNAi_result: WBRNAi00079111 Inferred_automatically: RNAi_primary
      WBRNAi00047620 Inferred_automatically: RNAi_primary
      WBRNAi00023473 Inferred_automatically: RNAi_primary
      WBRNAi00015161 Inferred_automatically: RNAi_primary
      WBRNAi00032420 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr115
      Expr7975
      Expr1026261
      Expr1151461
      Expr2003844
      Expr2022065
    Drives_construct: WBCnstr00013039
      WBCnstr00031907
    Construct_product: WBCnstr00031907
    Microarray_results: SMD_F47B8.3
      178790_at
      A_12_P116446
      Aff_F47B8.3
      GPL13394_WBGene00009804
      GPL13914_F47B8.3
      GPL14144_F47B8.3_212-271_0.911_8_A
      GPL19516_CGZ0022344
      GPL21109_F47B8.3
      GPL3518_CE10636
      GPL8304_CE_WBGene00009804_A
      GPL8673_F47B8_3P00048
      GPL8673_F47B8_3P00061
      GPL8673_F47B8_3P00209
      GPL9450_F47B8.3
      cea2.i.39291
    Expression_cluster (201)
    Interaction (51)
  Map_info: Positive: Positive_clone: F47B8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 6.2287
  Reference: WBPaper00031532
    WBPaper00032946
    WBPaper00041279
  Method: Gene