WormBase Tree Display for Gene: WBGene00017302

WBGene00017302 SMap: S_parent: Sequence: F09F7
  Identity: Version: 1
    Name: Sequence_name: F09F7.5
      Molecular_name: F09F7.5a
        F09F7.5a.1
        CE01237
        F09F7.5b
        CE29259
        F09F7.5a.2
        F09F7.5b.1
        F09F7.5b.2
      Other_name: CELE_F09F7.5 Accession_evidence: NDB BX284603
      Public_name: F09F7.5
    DB_info: Database: AceView gene 3G639
        WormQTL gene WBGene00017302
        WormFlux gene WBGene00017302
        NDB locus_tag CELE_F09F7.5
        Panther gene CAEEL|WormBase=WBGene00017302|UniProtKB=Q19275
          family PTHR13502
        NCBI gene 175764
        RefSeq protein NM_065785.8
            NM_001392099.1
        TrEMBL UniProtAcc H2KZJ0
            Q19275
        UniProt_GCRP UniProtAcc Q19275
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00093024
      WBVar01500260
      WBVar02132045
      WBVar01644754
      WBVar01644755
      WBVar01500122
      WBVar01500123
      WBVar01999608
      WBVar00398185
      WBVar00398186
      WBVar02018831
      WBVar00398187
      WBVar00398188
      WBVar00398189
      WBVar00398190
      WBVar00398191
      WBVar00398192
      WBVar02010501
      WBVar00398193
      WBVar00828291
      WBVar00828292
      WBVar00828293
      WBVar00828294
      WBVar00828295
      WBVar00828296
      WBVar01566418
      WBVar00828297
      WBVar00828298
      WBVar00828299
      WBVar00828300
      WBVar00828301
      WBVar00828302
      WBVar00828303
      WBVar00828304
      WBVar00828305
      WBVar00828306
      WBVar00828307
      WBVar00828308
      WBVar00828309
      WBVar00828310
      WBVar00828311
      WBVar00828312
      WBVar00828313
      WBVar01263721
      WBVar00828314
      WBVar01263722
      WBVar00828315
      WBVar01263723
      WBVar00828316
      WBVar00828317
      WBVar01263724
      WBVar00828318
      WBVar01263725
      WBVar00828319
      WBVar02055730
      WBVar00828320
      WBVar00828321
      WBVar00828322
      WBVar00828323
      WBVar00828324
      WBVar00828325
      WBVar00828326
      WBVar00828327
      WBVar00828328
      WBVar00828329
      WBVar00828330
      WBVar01479778
      WBVar01479779
      WBVar01500030
      WBVar01500031
      WBVar01893415
      WBVar00060827
    Strain: WBStrain00036518
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (32)
    Structured_description: Concise_description: F09F7.5 encodes, by alternative splicing, three isoforms of an unfamiliar protein required for in conjunction with LIN-35 for normally large brood size, in conjunction with CLK-2 for normally rapid growth, and for normally short lifespan; F09F7.5 binds equally well to Cdc42 and Rac GTPases in vitro, probably through its N-terminal P21-Rho-binding domain; F09F7.5 has no obvious orthologs outside of Caenorhabditis species, and aside from its N-terminus is interspersed with low-complexity residues. Paper_evidence: WBPaper00026643
            WBPaper00029258
            WBPaper00031036
            WBPaper00032021
          Curator_confirmed: WBPerson567
          Date_last_updated: 24 Jul 2008 00:00:00
      Automated_description: Predicted to enable small GTPase binding activity. Predicted to be involved in regulation of Rho protein signal transduction and regulation of cell shape. Predicted to be located in cytoskeleton and plasma membrane. Is an ortholog of human CDC42SE1 (CDC42 small effector 1) and CDC42SE2 (CDC42 small effector 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09F7.5a
      F09F7.5b
    Corresponding_CDS_history: F09F7.5c:wp275
    Corresponding_transcript: F09F7.5a.1
      F09F7.5a.2
      F09F7.5b.1
      F09F7.5b.2
    Other_sequence: CBC02919_1
      CR03845
      CRC05111_1
      CJC16954_1
    Associated_feature: WBsf645179
      WBsf658956
      WBsf992437
      WBsf992438
      WBsf1014905
      WBsf1014906
      WBsf224945
      WBsf224946
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1028990
      Expr1037436
      Expr1148124
      Expr2002354
      Expr2020572
    Drives_construct: WBCnstr00027408
    Construct_product: WBCnstr00027408
    Microarray_results (33)
    Expression_cluster (154)
    Interaction: WBInteraction000006658
      WBInteraction000031011
      WBInteraction000031566
      WBInteraction000031998
      WBInteraction000032488
      WBInteraction000228678
      WBInteraction000241957
      WBInteraction000276477
      WBInteraction000282952
      WBInteraction000287739
      WBInteraction000303051
      WBInteraction000306808
      WBInteraction000311879
      WBInteraction000315284
      WBInteraction000328381
      WBInteraction000329510
      WBInteraction000339145
      WBInteraction000345413
      WBInteraction000347163
      WBInteraction000349595
      WBInteraction000359147
      WBInteraction000363908
      WBInteraction000365921
      WBInteraction000366522
      WBInteraction000371183
      WBInteraction000373993
      WBInteraction000384633
      WBInteraction000384660
      WBInteraction000384661
      WBInteraction000390377
      WBInteraction000396408
      WBInteraction000408523
      WBInteraction000436139
      WBInteraction000439222
      WBInteraction000507101
      WBInteraction000507596
      WBInteraction000507601
      WBInteraction000507604
      WBInteraction000507606
      WBInteraction000507607
      WBInteraction000507608
      WBInteraction000507620
      WBInteraction000509817
      WBInteraction000509845
      WBInteraction000509846
      WBInteraction000509847
      WBInteraction000509850
      WBInteraction000509853
      WBInteraction000509854
      WBInteraction000509855
      WBInteraction000509858
      WBInteraction000509863
      WBInteraction000509865
      WBInteraction000509866
      WBInteraction000509868
      WBInteraction000509872
      WBInteraction000509876
      WBInteraction000509877
      WBInteraction000513076
      WBInteraction000513227
      WBInteraction000513236
      WBInteraction000514246
      WBInteraction000514253
      WBInteraction000514277
      WBInteraction000514288
      WBInteraction000514319
      WBInteraction000514326
      WBInteraction000514332
      WBInteraction000514337
      WBInteraction000514354
      WBInteraction000514367
      WBInteraction000514370
      WBInteraction000514377
      WBInteraction000514651
      WBInteraction000521528
      WBInteraction000546114
      WBInteraction000546334
      WBInteraction000546788
      WBInteraction000546898
      WBInteraction000547717
      WBInteraction000547718
      WBInteraction000547719
  Map_info: Positive: Positive_clone: F09F7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.55252
  Reference: WBPaper00032021
  Method: Gene