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WormBase Tree Display for Gene: WBGene00013567

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Name Class

WBGene00013567SMapS_parentSequenceY75B12B
IdentityVersion1
NameSequence_nameY75B12B.1
Molecular_name (11)
Other_nameCELE_Y75B12B.1Accession_evidenceNDBBX284605
Public_nameY75B12B.1
DB_infoDatabaseAceViewgene5P663
WormQTLgeneWBGene00013567
WormFluxgeneWBGene00013567
NDBlocus_tagCELE_Y75B12B.1
PanthergeneCAEEL|WormBase=WBGene00013567|UniProtKB=C8TDI7
familyPTHR23015
NCBIgene190716
RefSeqproteinNM_001269727.3
NM_001373163.2
NM_001269726.2
TrEMBLUniProtAccQ9XWB8
C8TDI7
H2KMK2
UniProt_GCRPUniProtAccC8TDI7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01493075
WBVar00478539
WBVar01072190
WBVar00478540
WBVar01072191
WBVar01072192
WBVar00478541
WBVar00478542
WBVar01072193
WBVar01072194
WBVar00478543
WBVar01828428
WBVar00591322
WBVar00591326
WBVar01800235
WBVar01463312
WBVar00018955
WBVar00018960
WBVar01744791
WBVar00018965
WBVar01775751
WBVar01500212
WBVar01500213
WBVar01499299
WBVar01499316
RNASeq_FPKM (74)
OrthologWBGene00078861Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00084345Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00065773Caenorhabditis remaneiFrom_analysisInparanoid_8
chrV_pilon.g16725Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (211)
Structured_descriptionConcise_descriptionY75B12B.1 encodes a probable transposase, with many C. elegans paralogsand distant similarity to rotifer and insect transposases; Y75B12B.1 hasno known function in mass RNAi assays; Y75B12B.1 mRNA is stabilized bybound GLD-1.Paper_evidenceWBPaper00006534
Curator_confirmedWBPerson567
Date_last_updated07 Apr 2007 00:00:00
Automated_descriptionEnriched in germ line; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain and HTH domain in Mos1 transposase.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY75B12B.1a
Y75B12B.1b
Y75B12B.1c
Corresponding_CDS_historyY75B12B.1:wp156
Corresponding_transcriptY75B12B.1a.1
Y75B12B.1a.2
Y75B12B.1a.3
Y75B12B.1b.1
Y75B12B.1c.1
Associated_featureWBsf1002253
WBsf1020991
WBsf233008
WBsf233009
Experimental_infoRNAi_resultWBRNAi00021426Inferred_automaticallyRNAi_primary
WBRNAi00058419Inferred_automaticallyRNAi_primary
WBRNAi00062473Inferred_automaticallyRNAi_primary
WBRNAi00037834Inferred_automaticallyRNAi_primary
WBRNAi00092488Inferred_automaticallyRNAi_primary
Expr_patternExpr16338
Expr1023086
Expr1036063
Expr1161837
Expr2008400
Expr2026641
Drives_constructWBCnstr00029598
WBCnstr00042917
Construct_productWBCnstr00029598
Microarray_results (21)
Expression_cluster (152)
SAGE_tagSAGE:tgttctctacgaggtgtStrandSense
Unambiguously_mapped
SAGE:tgcgaaggaaggctggaStrandAntisense
SAGE:ttttcttccggatttttStrandAntisense
SAGE:ttttcttccgStrandAntisense
SAGE:tgcgaaggaaStrandAntisense
SAGE:cataatcgggaattcgaStrandSense
Unambiguously_mapped
SAGE:atttgtgtctcgatatgStrandSense
Unambiguously_mapped
SAGE:atttgtgtctStrandSense
Unambiguously_mapped
SAGE:ggaaaaccagggaaagaStrandAntisense
SAGE:cataatcgggStrandSense
Unambiguously_mapped
InteractionWBInteraction000109890
WBInteraction000120559
WBInteraction000121652
WBInteraction000124857
WBInteraction000124936
WBInteraction000134387
WBInteraction000134831
WBInteraction000142804
WBInteraction000143365
WBInteraction000144560
WBInteraction000145179
WBInteraction000146880
WBInteraction000147885
WBInteraction000147930
WBInteraction000152009
WBInteraction000159863
WBInteraction000161523
WBInteraction000166574
WBInteraction000168016
WBInteraction000168073
WBInteraction000168214
WBInteraction000168266
WBInteraction000168386
WBInteraction000171798
WBInteraction000172034
WBInteraction000172597
WBInteraction000177091
WBInteraction000177588
WBInteraction000178022
WBInteraction000180496
WBInteraction000181261
WBInteraction000181656
WBInteraction000183019
WBInteraction000184113
WBInteraction000185521
WBInteraction000187039
WBInteraction000187084
WBInteraction000189382
WBInteraction000190047
WBInteraction000190324
WBInteraction000192121
WBInteraction000192541
WBInteraction000194336
WBInteraction000194525
WBInteraction000194992
WBInteraction000196196
WBInteraction000196598
WBInteraction000197193
WBInteraction000199249
WBInteraction000199499
WBInteraction000199875
WBInteraction000201143
WBInteraction000201228
WBInteraction000203309
WBInteraction000204154
WBInteraction000204497
WBInteraction000204964
WBInteraction000205373
WBInteraction000206482
WBInteraction000207367
WBInteraction000208037
WBInteraction000212434
WBInteraction000212991
WBInteraction000217100
WBInteraction000220837
WBInteraction000221597
WBInteraction000223496
WBInteraction000224146
WBInteraction000225100
WBInteraction000225377
WBInteraction000225745
WBInteraction000231473
WBInteraction000231811
WBInteraction000231878
WBInteraction000234747
WBInteraction000239304
WBInteraction000239670
WBInteraction000241945
WBInteraction000242935
WBInteraction000243002
WBInteraction000247135
WBInteraction000247607
WBInteraction000249611
WBInteraction000250519
WBInteraction000252176
WBInteraction000252778
WBInteraction000254442
WBInteraction000255295
WBInteraction000257483
WBInteraction000258107
WBInteraction000258458
WBInteraction000261533
WBInteraction000262077
WBInteraction000262488
WBInteraction000262704
WBInteraction000262893
WBInteraction000262963
WBInteraction000264513
WBInteraction000265572
WBInteraction000268010
WBInteraction000268440
WBInteraction000272141
WBInteraction000274784
WBInteraction000274943
WBInteraction000277510
WBInteraction000281317
WBInteraction000282011
WBInteraction000285190
WBInteraction000286603
WBInteraction000289305
WBInteraction000292806
WBInteraction000293236
WBInteraction000295091
WBInteraction000296493
WBInteraction000296840
WBInteraction000297810
WBInteraction000298354
WBInteraction000300925
WBInteraction000304836
WBInteraction000304961
WBInteraction000305095
WBInteraction000306509
WBInteraction000309126
WBInteraction000309428
WBInteraction000309916
WBInteraction000311756
WBInteraction000311769
WBInteraction000312899
WBInteraction000313560
WBInteraction000314078
WBInteraction000314461
WBInteraction000315225
WBInteraction000319201
WBInteraction000323979
WBInteraction000325079
WBInteraction000325643
WBInteraction000325847
WBInteraction000327950
WBInteraction000328307
WBInteraction000332186
WBInteraction000336042
WBInteraction000336569
WBInteraction000337782
WBInteraction000338447
WBInteraction000341579
WBInteraction000342700
WBInteraction000343900
WBInteraction000344553
WBInteraction000346145
WBInteraction000348030
WBInteraction000349930
WBInteraction000350678
WBInteraction000351181
WBInteraction000352659
WBInteraction000352757
WBInteraction000355042
WBInteraction000357118
WBInteraction000361151
WBInteraction000362310
WBInteraction000363423
WBInteraction000365232
WBInteraction000370133
WBInteraction000375644
WBInteraction000375760
WBInteraction000376802
WBInteraction000380563
WBInteraction000381037
WBInteraction000381829
WBInteraction000381888
WBInteraction000384019
WBInteraction000386123
WBInteraction000386334
WBInteraction000391853
WBInteraction000394690
WBInteraction000399417
WBInteraction000400929
WBInteraction000401394
WBInteraction000403585
WBInteraction000406186
WBInteraction000407445
WBInteraction000407631
WBInteraction000409472
WBInteraction000411694
WBInteraction000412291
WBInteraction000412967
WBInteraction000413248
WBInteraction000414406
WBInteraction000415167
WBInteraction000416512
WBInteraction000418479
WBInteraction000418966
WBInteraction000419215
WBInteraction000423017
WBInteraction000423125
WBInteraction000424346
WBInteraction000427000
WBInteraction000427656
WBInteraction000429049
WBInteraction000429101
WBInteraction000430732
WBInteraction000431721
WBInteraction000433192
WBInteraction000435459
WBInteraction000436057
WBInteraction000436295
WBInteraction000440123
WBInteraction000440425
WBInteraction000440481
WBInteraction000440961
WBInteraction000445156
WBInteraction000445918
WBInteraction000447196
WBInteraction000447292
WBInteraction000448321
WBInteraction000448666
WBInteraction000449644
WBInteraction000449748
WBInteraction000459370
WBInteraction000460551
WBInteraction000462351
WBInteraction000585339
Map_infoPositivePositive_cloneY75B12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV7.50751
ReferenceWBPaper00006534
MethodGene