WormBase Tree Display for Gene: WBGene00013294

WBGene00013294 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: pals-30 Person_evidence: WBPerson260
      Sequence_name: Y57G11B.1
      Molecular_name: Y57G11B.1
        WP:CE16665
        CE16665
        Y57G11B.1.1
      Other_name: CELE_Y57G11B.1 Accession_evidence: NDB BX284604
      Public_name: pals-30
    DB_info: Database: AceView gene 4P306
        WormQTL gene WBGene00013294
        WormFlux gene WBGene00013294
        NDB locus_tag CELE_Y57G11B.1
        NCBI gene 190365
        RefSeq mRNA NM_070365.1
          protein NP_502766.1
            NM_070365.2
        TREEFAM TREEFAM_ID TF322379
        UniProt UniProtAcc G5EF79
        TrEMBL UniProtAcc G5EF79
        UniProt_GCRP UniProtAcc G5EF79
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-30
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele: WBVar01499527
      WBVar02103865
      WBVar02103866
      WBVar02103867
      WBVar01582314
      WBVar02124119
      WBVar01582315
      WBVar01582316
      WBVar01582317
      WBVar01582318
      WBVar01582319
      WBVar02110322
      WBVar01582320
      WBVar01582321
      WBVar01582322
      WBVar01582323
      WBVar01498996
      WBVar01582324
      WBVar01582325
      WBVar01582326
      WBVar01582327
      WBVar01896673
      WBVar01499925
      WBVar00960275
      WBVar00960276
      WBVar01806114
      WBVar00576383
      WBVar00960277
      WBVar00960278
      WBVar00576384
      WBVar01806115
      WBVar00576386
      WBVar00960279
      WBVar00576387
      WBVar00960280
      WBVar00960281
      WBVar00576388
      WBVar00960282
      WBVar00576389
      WBVar00960283
      WBVar00576391
      WBVar00960284
      WBVar00960285
      WBVar00960286
      WBVar00960287
      WBVar02124708
      WBVar01732611
      WBVar01732612
      WBVar01732613
      WBVar02124362
      WBVar01968277
      WBVar01900967
      WBVar00441645
      WBVar00441646
      WBVar00441647
      WBVar02124019
      WBVar02090161
      WBVar02090162
      WBVar02090163
      WBVar02090164
      WBVar01500017
      WBVar02135127
      WBVar00195348
      WBVar00195349
      WBVar00195350
      WBVar00195351
      WBVar00195352
      WBVar00195353
      WBVar00195354
      WBVar00195355
      WBVar00195356
      WBVar00195357
      WBVar00195358
      WBVar00195359
      WBVar00195360
      WBVar01847300
      WBVar00195361
      WBVar01847301
      WBVar00091219
      WBVar00195362
      WBVar01847302
      WBVar00195363
      WBVar00195364
      WBVar00195365
      WBVar00195366
      WBVar00195367
      WBVar00195368
      WBVar00195369
      WBVar00195370
      WBVar01499492
      WBVar00195371
      WBVar00195372
      WBVar01499493
      WBVar00195373
      WBVar01499688
      WBVar01500245
      WBVar01499697
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP4603
    Ortholog: WBGene00142109 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00161337 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00061028 Caenorhabditis remanei From_analysis: OMA
      Sp34_30320300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12495 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (11)
    Structured_description: Automated_description: Enriched in NSM based on tiling array studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including Mercuric Chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y57G11B.1
    Corresponding_transcript: Y57G11B.1.1
    Associated_feature: WBsf1018665
      WBsf1018666
  Experimental_info: RNAi_result: WBRNAi00037589 Inferred_automatically: RNAi_primary
      WBRNAi00021130 Inferred_automatically: RNAi_primary
      WBRNAi00057676 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025596
      Expr1161082
      Expr2014702
      Expr2032938
    Drives_construct: WBCnstr00029707
    Construct_product: WBCnstr00029707
    Microarray_results (13)
    Expression_cluster (128)
    Interaction: WBInteraction000114936
      WBInteraction000127549
      WBInteraction000133656
      WBInteraction000134237
      WBInteraction000135228
      WBInteraction000138608
      WBInteraction000141365
      WBInteraction000146090
      WBInteraction000147040
      WBInteraction000148465
      WBInteraction000150533
      WBInteraction000175817
      WBInteraction000175940
      WBInteraction000176243
      WBInteraction000176886
      WBInteraction000179322
      WBInteraction000182696
      WBInteraction000183462
      WBInteraction000188955
      WBInteraction000190028
      WBInteraction000192305
      WBInteraction000193203
      WBInteraction000195939
      WBInteraction000201202
      WBInteraction000204162
      WBInteraction000205173
      WBInteraction000206573
      WBInteraction000213139
      WBInteraction000223890
      WBInteraction000224304
      WBInteraction000225455
      WBInteraction000233586
      WBInteraction000234767
      WBInteraction000236923
      WBInteraction000238241
      WBInteraction000239191
      WBInteraction000241767
      WBInteraction000245572
      WBInteraction000246017
      WBInteraction000247266
      WBInteraction000248151
      WBInteraction000249394
      WBInteraction000273680
      WBInteraction000274401
      WBInteraction000277884
      WBInteraction000284237
      WBInteraction000284249
      WBInteraction000284495
      WBInteraction000285680
      WBInteraction000287347
      WBInteraction000288219
      WBInteraction000291544
      WBInteraction000293670
      WBInteraction000300967
      WBInteraction000303448
      WBInteraction000303872
      WBInteraction000307716
      WBInteraction000307909
      WBInteraction000310109
      WBInteraction000311580
      WBInteraction000312167
      WBInteraction000313584
      WBInteraction000313945
      WBInteraction000316067
      WBInteraction000324175
      WBInteraction000326583
      WBInteraction000327454
      WBInteraction000328619
      WBInteraction000335385
      WBInteraction000337758
      WBInteraction000338847
      WBInteraction000338949
      WBInteraction000340136
      WBInteraction000342210
      WBInteraction000346096
      WBInteraction000346199
      WBInteraction000357323
      WBInteraction000365027
      WBInteraction000369721
      WBInteraction000371706
      WBInteraction000371829
      WBInteraction000374240
      WBInteraction000383512
      WBInteraction000386942
      WBInteraction000390439
      WBInteraction000393823
      WBInteraction000394876
      WBInteraction000394952
      WBInteraction000397028
      WBInteraction000400767
      WBInteraction000405980
      WBInteraction000414612
      WBInteraction000414662
      WBInteraction000416308
      WBInteraction000417686
      WBInteraction000424866
      WBInteraction000432458
      WBInteraction000437012
      WBInteraction000444586
      WBInteraction000449210
      WBInteraction000449958
      WBInteraction000451014
      WBInteraction000455294
      WBInteraction000560970
  Map_info: Positive: Positive_clone: Y57G11B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 12.2282
  Reference (2)
  Method: Gene