WormBase Tree Display for Gene: WBGene00009030

WBGene00009030 SMap: S_parent: Sequence: F21H7
  Identity: Version: 2
    Name: CGC_name: clec-233 Person_evidence: WBPerson2531
      Sequence_name: F21H7.4
      Molecular_name: F21H7.4
        F21H7.4.1
        CE15876
      Other_name: CELE_F21H7.4 Accession_evidence: NDB BX284605
      Public_name: clec-233
    DB_info: Database: AceView gene 5Q715
        WormQTL gene WBGene00009030
        WormFlux gene WBGene00009030
        NDB locus_tag CELE_F21H7.4
        Panther gene CAEEL|WormBase=WBGene00009030|UniProtKB=O45388
          family PTHR47517
        NCBI gene 180089
        RefSeq protein NM_074696.5
        TREEFAM TREEFAM_ID TF315870
        TrEMBL UniProtAcc O45388
        UniProt_GCRP UniProtAcc O45388
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-233
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele: WBVar01078994
      WBVar01078995
      WBVar01078996
      WBVar01078997
      WBVar01078998
      WBVar01078999
      WBVar01079000
      WBVar01079001
      WBVar01079002
      WBVar01079003
      WBVar01079004
      WBVar01079005
      WBVar01079006
      WBVar02122682
      WBVar01746048
      WBVar01746049
      WBVar01746050
      WBVar01746051
      WBVar01843182
      WBVar02104857
      WBVar02104858
      WBVar02104859
      WBVar01905415
      WBVar01905416
      WBVar02148333
      WBVar02107644
      WBVar02107645
      WBVar00033720
      WBVar01809321
      WBVar01592904
      WBVar01592905
      WBVar02123301
      WBVar01592906
      WBVar01592907
      WBVar00480859
      WBVar00593273
      WBVar01592908
      WBVar00593275
      WBVar01592909
      WBVar00593276
      WBVar00593277
      WBVar01592910
      WBVar01592911
      WBVar00593278
      WBVar01592912
      WBVar01592913
      WBVar01592914
      WBVar01592915
      WBVar01592916
      WBVar01592917
      WBVar01498548
      WBVar01592918
      WBVar02121289
      WBVar01592919
      WBVar01592920
      WBVar01592921
      WBVar01592922
      WBVar01592923
      WBVar02124057
      WBVar01499299
      WBVar02123706
      WBVar02124626
      WBVar02124261
      WBVar01991204
      WBVar01991205
      WBVar02091144
      WBVar01777625
      WBVar02124830
    RNASeq_FPKM (74)
    Ortholog (46)
    Paralog (126)
    Structured_description: Automated_description: Enriched in several structures, including germ line; head mesodermal cell; muscle cell; pharyngeal-intestinal valve cell; and rectal gland cell based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F21H7.4
    Corresponding_transcript: F21H7.4.1
    Other_sequence: CSC02137_1
      FD515894.1
      CR05103
      CRC02006_1
    Associated_feature: WBsf655139
      WBsf662144
      WBsf662145
      WBsf662146
      WBsf233087
  Experimental_info: RNAi_result: WBRNAi00112635 Inferred_automatically: RNAi_primary
      WBRNAi00045257 Inferred_automatically: RNAi_primary
      WBRNAi00008678 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4945
      Expr1010419
      Expr1033937
      Expr1149188
      Expr2010139
      Expr2028380
    Drives_construct: WBCnstr00012358
      WBCnstr00032511
    Construct_product: WBCnstr00032511
    Microarray_results (16)
    Expression_cluster (139)
    Interaction: WBInteraction000113788
      WBInteraction000113834
      WBInteraction000113880
      WBInteraction000113929
      WBInteraction000113980
      WBInteraction000113981
      WBInteraction000113982
      WBInteraction000114059
      WBInteraction000116402
      WBInteraction000116447
      WBInteraction000116490
      WBInteraction000116532
      WBInteraction000116574
      WBInteraction000116575
      WBInteraction000116576
      WBInteraction000116577
      WBInteraction000116578
      WBInteraction000116579
      WBInteraction000116580
      WBInteraction000116581
      WBInteraction000116582
      WBInteraction000116583
      WBInteraction000116584
      WBInteraction000116585
      WBInteraction000116586
      WBInteraction000116587
      WBInteraction000116588
      WBInteraction000116589
      WBInteraction000116590
      WBInteraction000116591
      WBInteraction000116592
      WBInteraction000116593
      WBInteraction000116594
      WBInteraction000116595
      WBInteraction000116596
      WBInteraction000116597
      WBInteraction000116598
      WBInteraction000116599
      WBInteraction000116600
      WBInteraction000116601
      WBInteraction000116602
      WBInteraction000116603
      WBInteraction000116604
      WBInteraction000116605
      WBInteraction000116606
      WBInteraction000116607
      WBInteraction000116608
      WBInteraction000116609
      WBInteraction000116610
      WBInteraction000116611
      WBInteraction000116612
      WBInteraction000116613
      WBInteraction000116614
      WBInteraction000123179
      WBInteraction000152832
      WBInteraction000159123
      WBInteraction000159124
      WBInteraction000166709
      WBInteraction000169892
      WBInteraction000173062
      WBInteraction000336335
      WBInteraction000336415
      WBInteraction000564497
  Map_info: Map: V Position: 9.85735 Error: 0.001091
    Positive: Positive_clone: F21H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031003
    WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene