WormBase Tree Display for Gene: WBGene00011463

WBGene00011463 SMap: S_parent: Sequence: T05A10
  Identity: Version: 1
    Name: Sequence_name: T05A10.6
      Molecular_name: T05A10.6
        T05A10.6.1
        CE40870
      Other_name: CELE_T05A10.6 Accession_evidence: NDB BX284606
      Public_name: T05A10.6
    DB_info: Database: AceView gene XL412
        WormQTL gene WBGene00011463
        WormFlux gene WBGene00011463
        NDB locus_tag CELE_T05A10.6
        NCBI gene 188097
        RefSeq protein NM_077403.6
        TREEFAM TREEFAM_ID TF319390
        TrEMBL UniProtAcc P90960
        UniProt_GCRP UniProtAcc P90960
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00082811
      WBVar00082812
      WBVar00236743
      WBVar01498845
      WBVar00515942
      WBVar01498846
      WBVar00515943
      WBVar01527671
      WBVar01183543
      WBVar01183544
      WBVar01183545
      WBVar01183546
      WBVar01183547
      WBVar01183548
      WBVar01183549
      WBVar01183550
      WBVar01183551
      WBVar01183552
      WBVar01183553
      WBVar01183554
      WBVar01620405
      WBVar01620406
      WBVar01470947
      WBVar01470948
      WBVar01928233
      WBVar01889157
      WBVar01889158
      WBVar01889159
      WBVar01498960
      WBVar01500067
    RNASeq_FPKM (74)
    Ortholog (19)
    Structured_description: Automated_description: Enriched in g1 and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; D-glucose; and cholesterol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: CAP superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05A10.6
    Corresponding_CDS_history: T05A10.6:wp173
    Corresponding_transcript: T05A10.6.1
    Other_sequence: CJC09338_1
      CBC09756
    Associated_feature (3)
  Experimental_info: RNAi_result: WBRNAi00045987 Inferred_automatically: RNAi_primary
      WBRNAi00035164 Inferred_automatically: RNAi_primary
      WBRNAi00018174 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013295
      Expr1156056
      Expr2005838
      Expr2024055
    Drives_construct: WBCnstr00030636
    Construct_product: WBCnstr00030636
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00040420:FLP_enriched
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_upregulated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050990:NMDA-neuron_enriched
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059421:daf-1(m40)_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00061340:g1A
      WBPaper00061340:g1P
      WBPaper00061527:T16H12.9-kin-9_20752
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065841:41_0
      WBPaper00065841:41_1
      WBPaper00065841:41_2
      WBPaper00065841:78_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031003:hlh_1_enriched
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040821:Au-NP_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045673:colistin_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (13)
  Map_info: Positive: Positive_clone: T05A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 2.53384
  Method: Gene