WormBase Tree Display for Gene: WBGene00020189
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| WBGene00020189 | SMap | S_parent | Sequence | T03F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tfbm-1 | Person_evidence | WBPerson7169 | |||||
| WBPerson117 | |||||||||
| Sequence_name | T03F1.7 | ||||||||
| Molecular_name | T03F1.7 | ||||||||
| T03F1.7.1 | |||||||||
| CE30685 | |||||||||
| Other_name | CELE_T03F1.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tfbm-1 | ||||||||
| DB_info | Database | AceView | gene | 1E420 | |||||
| WormQTL | gene | WBGene00020189 | |||||||
| WormFlux | gene | WBGene00020189 | |||||||
| NDB | locus_tag | CELE_T03F1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020189|UniProtKB=P91424 | |||||||
| family | PTHR11727 | ||||||||
| NCBI | gene | 188022 | |||||||
| RefSeq | protein | NM_058841.9 | |||||||
| KEGG | KEGG_id | 2.1.1.- | |||||||
| NemaPath | KEGG_id | 2.1.1.- | |||||||
| SwissProt | UniProtAcc | P91424 | |||||||
| TREEFAM | TREEFAM_ID | TF300798 | |||||||
| UniProt_GCRP | UniProtAcc | P91424 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jan 2013 16:32:43 | WBPerson2970 | Name_change | CGC_name | tfbm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tfbm | ||||||||
| Allele | WBVar00152657 | ||||||||
| WBVar02109580 | |||||||||
| WBVar01532045 | |||||||||
| WBVar01298473 | |||||||||
| WBVar01846285 | |||||||||
| WBVar01956836 | |||||||||
| WBVar01932214 | |||||||||
| WBVar01932215 | |||||||||
| WBVar01932216 | |||||||||
| WBVar01932217 | |||||||||
| WBVar01932218 | |||||||||
| WBVar01932219 | |||||||||
| WBVar01932220 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01398897 | |||||||||
| WBVar01398898 | |||||||||
| WBVar01499985 | |||||||||
| WBVar00628827 | |||||||||
| WBVar02039463 | |||||||||
| WBVar00628828 | |||||||||
| WBVar02039466 | |||||||||
| WBVar00628829 | |||||||||
| WBVar00628830 | |||||||||
| WBVar02039467 | |||||||||
| WBVar00628831 | |||||||||
| WBVar02039468 | |||||||||
| WBVar00628832 | |||||||||
| WBVar00628833 | |||||||||
| WBVar00628834 | |||||||||
| WBVar00628835 | |||||||||
| WBVar00628836 | |||||||||
| WBVar00628837 | |||||||||
| WBVar00628838 | |||||||||
| WBVar00628839 | |||||||||
| WBVar00628840 | |||||||||
| WBVar00628841 | |||||||||
| WBVar00628842 | |||||||||
| WBVar00628843 | |||||||||
| WBVar01411440 | |||||||||
| WBVar00628844 | |||||||||
| WBVar00628845 | |||||||||
| WBVar01411441 | |||||||||
| WBVar01411442 | |||||||||
| WBVar00628846 | |||||||||
| WBVar00628847 | |||||||||
| WBVar00628848 | |||||||||
| WBVar00628849 | |||||||||
| WBVar00628850 | |||||||||
| WBVar00628851 | |||||||||
| WBVar00628852 | |||||||||
| WBVar00628853 | |||||||||
| WBVar00307465 | |||||||||
| WBVar01281083 | |||||||||
| WBVar01281085 | |||||||||
| WBVar01281087 | |||||||||
| WBVar01281088 | |||||||||
| WBVar01281089 | |||||||||
| WBVar01281090 | |||||||||
| WBVar01281091 | |||||||||
| WBVar01281092 | |||||||||
| WBVar01281093 | |||||||||
| WBVar01281094 | |||||||||
| WBVar00031511 | |||||||||
| WBVar02127017 | |||||||||
| WBVar02127018 | |||||||||
| WBVar00031536 | |||||||||
| WBVar00317421 | |||||||||
| WBVar00331315 | |||||||||
| WBVar00097705 | |||||||||
| WBVar00331316 | |||||||||
| WBVar00331317 | |||||||||
| WBVar00331318 | |||||||||
| WBVar01498959 | |||||||||
| WBVar00331319 | |||||||||
| WBVar01298362 | |||||||||
| WBVar00031551 | |||||||||
| WBVar00331320 | |||||||||
| WBVar00331321 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP1120 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00008455 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable mitochondrial transcription factor activity and rRNA (adenine-N6,N6-)-dimethyltransferase activity. Predicted to be involved in rRNA methylation and transcription initiation at mitochondrial promoter. Predicted to be located in mitochondrial matrix. Is an ortholog of human TFB1M (transcription factor B1, mitochondrial). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T03F1.7 | |||||||
| Corresponding_transcript | T03F1.7.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf664073 | ||||||||
| WBsf219190 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035097 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052279 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052286 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066571 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004116 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023096 | ||||||||
| Expr1038781 | |||||||||
| Expr1155917 | |||||||||
| Expr2017376 | |||||||||
| Expr2035513 | |||||||||
| Drives_construct | WBCnstr00025313 | ||||||||
| Construct_product | WBCnstr00025313 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (73) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | I | Position | -1.99378 | |||||
| Positive | Positive_clone | T03F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035543 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
