WormBase Tree Display for Gene: WBGene00006603

WBGene00006603 SMap: S_parent: Sequence: F19H8
  Identity: Version: 1
    Name: CGC_name: tps-2
      Sequence_name: F19H8.1
      Molecular_name: F19H8.1a
        F19H8.1a.1
        CE37507
        F19H8.1b
        CE48622
        F19H8.1b.1
      Other_name: CELE_F19H8.1 Accession_evidence: NDB BX284602
      Public_name: tps-2
    DB_info: Database: AceView gene 2O895
        WormQTL gene WBGene00006603
        WormFlux gene WBGene00006603
        NDB locus_tag CELE_F19H8.1
        Panther gene CAEEL|WormBase=WBGene00006603|UniProtKB=O45380
          family PTHR10788
        NCBI gene 3565050
        RefSeq protein NM_064634.6
            NM_001377904.2
        KEGG KEGG_id 2.4.1.15
        NemaPath KEGG_id 2.4.1.15
        SwissProt UniProtAcc O45380
        TrEMBL UniProtAcc U4PLZ2
        UniProt_GCRP UniProtAcc O45380
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tps
    Allele: WBVar00790097
      WBVar00790098
      WBVar00790099
      WBVar01499702
      WBVar00790100
      WBVar00790101
      WBVar01497864
      WBVar00790102
      WBVar00790103
      WBVar00790104
      WBVar00790105
      WBVar00790106
      WBVar00790107
      WBVar01414970
      WBVar00790108
      WBVar00790109
      WBVar00790110
      WBVar00790111
      WBVar00790112
      WBVar00790113
      WBVar00790114
      WBVar00091813
      WBVar01253457
      WBVar01498435
      WBVar01253458
      WBVar01253466
      WBVar01253468
      WBVar01253469
      WBVar00261152
      WBVar01896105
      WBVar01944260
      WBVar02012392
      WBVar01497532
      WBVar00385465
      WBVar00385466
      WBVar00385467
      WBVar00385468
      WBVar00385469
      WBVar01696534
      WBVar00385470
      WBVar01696535
      WBVar01696536
      WBVar00385471
      WBVar00385472
      WBVar01696537
      WBVar00385473
      WBVar01696538
      WBVar00385474
      WBVar00250674
      WBVar00385475
      WBVar00385476
      WBVar01394744
      WBVar00385477
      WBVar00385478
      WBVar00385479
      WBVar00385480
      WBVar00385481
      WBVar00385482
      WBVar00385483
      WBVar00385484
      WBVar00385485
      WBVar00093093
      WBVar00385486
      WBVar00385487
      WBVar00385488
      WBVar01767581
      WBVar02087746
      WBVar01496662
      WBVar02131202
      WBVar00232451
      WBVar00232452
      WBVar00232453
      WBVar01548074
      WBVar01548075
      WBVar01548076
      WBVar01548077
      WBVar01548078
      WBVar01548079
      WBVar01548080
      WBVar01320634
      WBVar01320638
      WBVar01320639
      WBVar00017138
      WBVar00017143
      WBVar01898602
      WBVar00258309
      WBVar00790045
      WBVar00017148
      WBVar00790046
      WBVar00790047
      WBVar01606422
      WBVar01407051
      WBVar00017153
      WBVar00790048
      WBVar00790049
      WBVar00790050
      WBVar00017158
      WBVar00790051
      WBVar00790052
      WBVar00790053
      WBVar00790054
      WBVar00017163
      WBVar00790055
      WBVar00790056
      WBVar00790057
      WBVar00017168
      WBVar00249657
      WBVar00790058
      WBVar01267106
      WBVar00790059
      WBVar00790060
      WBVar00017173
      WBVar01267117
      WBVar00790061
      WBVar01540289
      WBVar00790062
      WBVar00017178
      WBVar00790063
      WBVar01950608
      WBVar00790064
      WBVar00790065
      WBVar01563331
      WBVar00790066
      WBVar00017183
      WBVar00790067
      WBVar01385003
      WBVar00790068
      WBVar00017188
      WBVar00790069
      WBVar00790070
      WBVar00790071
      WBVar00017193
      WBVar00790072
      WBVar00790073
      WBVar00790074
      WBVar01498941
      WBVar00790075
      WBVar00017198
      WBVar00790076
      WBVar00790077
      WBVar00790078
      WBVar00017203
      WBVar00790079
      WBVar00790080
      WBVar00790081
      WBVar00017208
      WBVar00790082
      WBVar01395391
      WBVar00790083
      WBVar00790084
      WBVar00239080
      WBVar00017213
      WBVar00790085
      WBVar00790086
      WBVar00790087
      WBVar00790088
      WBVar00790089
      WBVar00790090
      WBVar01494540
      WBVar00790091
      WBVar00790092
      WBVar00790093
      WBVar00790094
      WBVar00790095
      WBVar00790096
    Strain: WBStrain00031474
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (37)
    Paralog: WBGene00001649 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00006602 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: tps-2 encodes one of two trehalose-6-phosphate synthase proteins in C. elegans, and RNAi of both enzymes leads to a more than 90% reduction decrease in trehalose levels, but does not appear to affect viability or development; the tps-2 mRNA is expressed throughout development. Paper_evidence: WBPaper00006140
            WBPaper00017649
            WBPaper00019120
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity. Predicted to contribute to trehalose-phosphatase activity. Predicted to be involved in trehalose biosynthetic process and trehalose metabolism in response to stress. Predicted to be part of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming). Expressed in hypodermis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F19H8.1a
      F19H8.1b
    Corresponding_CDS_history: F19H8.1:wp91
      F19H8.1:wp132
    Corresponding_transcript: F19H8.1a.1
      F19H8.1b.1
    Other_sequence (111)
    Associated_feature (16)
  Experimental_info: RNAi_result (12)
    Expr_pattern (12)
    Drives_construct: WBCnstr00003736
      WBCnstr00015345
      WBCnstr00015346
      WBCnstr00034276
      WBCnstr00042530
    Construct_product: WBCnstr00034276
    Microarray_results (23)
    Expression_cluster (174)
    Interaction (122)
  Map_info: Map: II Position: 23.148 Error: 0.005869
    Positive: Positive_clone: F19H8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4735
        5024
    Pseudo_map_position
  Reference (17)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene