WormBase Tree Display for Gene: WBGene00010290
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| WBGene00010290 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F58H1.7 | |||||||
| Molecular_name | F58H1.7a | ||||||||
| F58H1.7a.1 | |||||||||
| CE20895 | |||||||||
| F58H1.7b | |||||||||
| CE11412 | |||||||||
| F58H1.7b.1 | |||||||||
| Other_name | nrap-1 | Paper_evidence | WBPaper00053454 | ||||||
| Remark | This name was not requested prior to publication. It is felt that this would introduce confusion as there is a human gene NRAP which is not the ortholog of this gene. This gene also appears to be restricted to invertebrates as there is only a single fly ortholog according to AGR/DIOPT. | ||||||||
| CELE_F58H1.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F58H1.7 | ||||||||
| DB_info | Database | AceView | gene | 5M444 | |||||
| WormQTL | gene | WBGene00010290 | |||||||
| WormFlux | gene | WBGene00010290 | |||||||
| NDB | locus_tag | CELE_F58H1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010290|UniProtKB=G5EBT2 | |||||||
| family | PTHR20967 | ||||||||
| NCBI | gene | 179636 | |||||||
| RefSeq | protein | NM_001047675.4 | |||||||
| NM_001047674.3 | |||||||||
| TrEMBL | UniProtAcc | G5EEF9 | |||||||
| G5EBT2 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EBT2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jan 2021 22:55:32 | WBPerson1983 | Name_change | Other_name | nrap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00094471 | Inferred_automatically | From strain object: RB2511 | ||||||
| WBVar01866517 | |||||||||
| WBVar01866518 | |||||||||
| WBVar02137212 | |||||||||
| WBVar01499357 | |||||||||
| WBVar01499358 | |||||||||
| WBVar01499547 | |||||||||
| WBVar01743632 | |||||||||
| WBVar00471783 | |||||||||
| WBVar00471784 | |||||||||
| WBVar00471785 | |||||||||
| WBVar00471786 | |||||||||
| WBVar00471787 | |||||||||
| WBVar00471788 | |||||||||
| WBVar02068817 | |||||||||
| WBVar01974923 | |||||||||
| WBVar00276771 | |||||||||
| WBVar01052036 | |||||||||
| WBVar01052037 | |||||||||
| WBVar01052038 | |||||||||
| WBVar01052039 | |||||||||
| WBVar01052040 | |||||||||
| WBVar01052041 | |||||||||
| WBVar01052042 | |||||||||
| WBVar01052043 | |||||||||
| WBVar01052044 | |||||||||
| WBVar01052045 | |||||||||
| WBVar01052046 | |||||||||
| WBVar01052047 | |||||||||
| WBVar01052048 | |||||||||
| WBVar01484752 | |||||||||
| WBVar01990989 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00006075 | |||||||||
| WBVar01590196 | |||||||||
| Strain | WBStrain00033186 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Expressed in glutamatergic neurons. Is predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor domain class A. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58H1.7a | |||||||
| F58H1.7b | |||||||||
| Corresponding_transcript | F58H1.7a.1 | ||||||||
| F58H1.7b.1 | |||||||||
| Other_sequence | AYC03160_1 | ||||||||
| NB07208 | |||||||||
| PPC05517_1 | |||||||||
| NBC01059_1 | |||||||||
| MC02424 | |||||||||
| BU087063.1 | |||||||||
| Name_isotig05334 | |||||||||
| Acan_contig04134 | |||||||||
| MJ00512 | |||||||||
| SC01439 | |||||||||
| MJC04517_1 | |||||||||
| SSC00667_1 | |||||||||
| PVC01610_1 | |||||||||
| MI03758 | |||||||||
| Tcir_isotig11927 | |||||||||
| ACC01859_1 | |||||||||
| MCC01079_1 | |||||||||
| Tcol_isotig10883 | |||||||||
| HBC07566_1 | |||||||||
| ES743645.1 | |||||||||
| AM743491.1 | |||||||||
| BU665958.1 | |||||||||
| MC03386 | |||||||||
| TDC03262_1 | |||||||||
| CRC09581_1 | |||||||||
| CV200937.1 | |||||||||
| Oden_isotig21805 | |||||||||
| MI04477 | |||||||||
| MI00688 | |||||||||
| AE00353 | |||||||||
| SS00591 | |||||||||
| CBC07630_1 | |||||||||
| BU088641.1 | |||||||||
| GR977702.1 | |||||||||
| NB07464 | |||||||||
| JI212393.1 | |||||||||
| Hbac_isotig04940 | |||||||||
| JO474232.1 | |||||||||
| MIC01106_1 | |||||||||
| EL888565.1 | |||||||||
| BU088459.1 | |||||||||
| BU666743.1 | |||||||||
| CJC01516_1 | |||||||||
| CBC06764_1 | |||||||||
| NAC00734_1 | |||||||||
| FG588789.1 | |||||||||
| CR10765 | |||||||||
| Associated_feature | WBsf669435 | ||||||||
| WBsf669436 | |||||||||
| WBsf669437 | |||||||||
| WBsf1001491 | |||||||||
| WBsf1001492 | |||||||||
| WBsf1001493 | |||||||||
| WBsf1020520 | |||||||||
| WBsf1020521 | |||||||||
| WBsf008058 | |||||||||
| WBsf234596 | |||||||||
| WBsf234597 | |||||||||
| WBsf234598 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002177 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049072 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111163 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016027 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13695 | ||||||||
| Expr1017647 | |||||||||
| Expr1034490 | |||||||||
| Expr1152812 | |||||||||
| Expr2004426 | |||||||||
| Expr2022649 | |||||||||
| Drives_construct | WBCnstr00031523 | ||||||||
| WBCnstr00039944 | |||||||||
| Construct_product | WBCnstr00031523 | ||||||||
| WBCnstr00039944 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (244) | |||||||||
| Interaction (91) | |||||||||
| Map_info | Positive | Positive_clone | F58H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 3.5457 | |||||||
| Reference | WBPaper00053454 | ||||||||
| WBPaper00060161 | |||||||||
| WBPaper00064302 | |||||||||
| Method | Gene |
