WormBase Tree Display for Feature: WBsf961230
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| WBsf961230 | SMap | S_parent | Sequence | T04A11 |
|---|---|---|---|---|
| Sequence_details | Flanking_sequences | attttcagatgtcgagaaaatttccgtctttcatagttgatgcatttacaactaagagttttgcag | gaaatcctgcagcagtttgtcttattccagaggtaattagtaataatttggaccatagtatatggtttgtatttaattaaaaataattgatttataatttccaatgatgacactccatctttaatcattgttttagttttatttccaggtttttaaagaccaagagtatttgaaaatcgctgccgaattcaatctctccgagacagcatttccagttccaattggttcaactgacttcaagacttgctctcagttttccctacgctggtttactccaaaaactgaagttccgttgtgtggtcacgcaactcttgcaacgtcacacgttctgttcaatgaagttggaaatgtgaataaggagattaaattcgatacccaatccggagttttgattgcaaaaagagatgaaaaaggaaatgtggagatgaattttcccgaatacgatttggcgtcagtgaagttcaatgataccccaaatccattgcagggcattttttcggaggtaatattttataaaatatttcaaaagtcttttcgagaaaattgaaatttcagttcgaagcaccatcattcctgtttgaagttatcaagtgcgttgttccaactgaggtgaatttttgtagttttattgggtatgtgtggtagtgcctgcctacctgcttaagtgccttcctagctagaactccggtgtttggtgttcatgcaatgtggtaggcacgaggcaggcaggcaggccttattccgataatttttcgtgaaaagtattttattctgaaaatctgaacatttacgacaacaaacctggaaaattcctcctgaaaaccaggaaattgacgtgtgtaaatctgaaatttgtgtctgaaaatctgataacatacgtcaaaatttttgtaaatctatacctgaaagcatgaaacttttcgtctaaaataaattcaagtatgaaaattattgtccaaccgtcttaaaatttattactgaaaaactggaattttacatctgaaaatccaaaaaatgcacgtttaaaaatcgtaatccagtcccttctttttcaatcagctcatatttcagatgattatcgaatcagtggtgtactcttcaaaatctcgcaaactaatcgtcattgtggatccagaaaccaccaaatttgaacttgaagccgttcgcattgattgctcaaaaatgctcgagattcacgatggaagttttgtaaggggccttgccatttctcttcgtccatcaaatccaatggctcaaggatttgtggattcttctgatgaaccatatgactatgcatgccgttattttgctccgtgggttggaatcgatgaggatccagcaactggatctgcgcaatgtgttatgggaccgttctggtcgaagatgctcgggaagaacgagttgtatgcttttcaggtaattatcattatggagctttttcaatgataattttgatttgtaggcttttccaactcgaggagctcaattcaggattcgtcttcaagatgaccgtgtgattttgaacggaccttctgtcacagtgctccggggagagcttgcgttgaactaattttcaatatgaatttgaagtaaaattcccaagaactctactccaccctcaaagtttttgatttttgatgactatcaataaatttatcttctcatttcacatttctcccatttccaaagtactttcaaacaaatttccaaacgtataaagaatctgcaacaacacaatcacaaccactacaaccccttcttttcattttcttttcacatgttttccacctttacaagaccaactgttgaccccatgtccttcatctttttccttttttcacttcttttggcaaacgacgtttatttggaatttcattagccattcgacacgttgtcacagatgactgaacactatccttcgtacattgtcgatgcttttgcaaagaagagattttctggaaatccagctgcggtttgtcttataccacaggtaggtcccaaaagttttatttttctaatatagatggtgagtatgaaatatgtatttaaaataacttttacattgtaatggattaaaaagatagaattttgaaagcaaactataagtttctaccggaaaattattttatttgattcatttgaaaaagtactcgacggcaataaatacgtcgtagaaactgttttgaaaagttgaaaaatagcttaaattttaaatgttattaaatatggttctggaaataaaattagaaaaatttttcctgacttttagagaaatagcatgcaattttccgatccattttacttcatcggaggcgttttccgggcgaaatacgggcccctttgaatagccttgctcaagttagtaccaactagattattccaaatttccaggcaaaaaaggatgacgaatacttaaaaatagctgccgaattcaatgtctctgaaacagcatttccagttccaattggctcatcagactacaagaaatgtgctcatttttcccttcgctggttcacttcaactgccgaagttccattgtgtggtcacgcgacacttgccacttcacacgtgttattcaatgaaattggaaatgagaataaggagctcaagtttgacacactgacaggattattggttgtgagaagggatagtatcggaaatgttgagctgaatttgcccgaatatgatttgacgtctatcaagtttcatcacacagtgaacccacttcatgggattttctctgaattcaaggcgccgcatttcctatttgatattgtaaagtgtgtggttccaactgaggtttgtgatattttgaactagaagaaaatcacgtagagatagtaaacttgaaatgctttgagattagagtgcgttgcgaaaattttttatcaattgaatgttctttgagttatttgttatgaaaaactaaataaggtttcaaaatagtctacatatttattgaattcttaaactcgtggctagagtggataccgtaacttttgtgtgcaatttgcactgatttagatccagtaatagaacagttatatggaaaataatgtatcagacagcaaaaattccactggaaattcgaaatcttgtacttcagatggcaatcgaagcttgcgtgtacgcagcgaaacctcgagtcttggtagtcgtagtagatcctcttacaacaaaatttgaattggaagcagttaaaatcgatgttacacgaatgcttcaaattcacgataacggttttctacaaggaattgcattgacgttgagaccgaagaatgcattaattcaaggattcaccgattcttctgatgaaccatttgactatgcttgtcgttactttgctccttgggttggaataaatgaggatccagcaacagggcatgcacaatgtgcaatgggtcccttttggtcaaagataacgggaaaaaagtcgctatatgcatttcaagtgagtttatctgggcacatggctttttaaaggttttttaatcgtccttaatattccaggcatatccaactcgaggaggtctgttccgtttaagcttccacgatggacgagttatattaaatggaccatctgtcactgtacttagaggagagattacattagatgaaccgacattttactgataacttgaaatttaaataaacatgatttctttagaaaggtatcaaattttctctatgcaaaatgtcattctagaaaaattctaacaaaaagtctacacccctcaattgaaacgtaaatgaatttatgtaaaataaatacaatcaaatattcaaaaattgcagacaagtagaaaaccgaaatgttgtcaaaatttgcaaaaatgagtgtatagaaaaaaagaaaatgaacatcgacccgcaaaaagtcaaaacacgcacaactgaatcacacaaatacacaaggaaaatggtggtgactatggaacagaaataagattacatggaatgtcagatatcttataggacaagaaattgaaaatgaaactgttgagaaaaaatgtggtaggaagtagagaaaaaataattataaatagtaaataattaggtctcaagtttagcatatctcatgccgtttcggtactcgtggctgttatcagttgtactgttcgcttcgaggttggcactttgccattcagattgggttgcagcagctgttccagttgtggctgagccacctaatcctcggatttcaacttcggctcctgaaaaaaagttattttttagaaaaaaaaagatatcttcttaccgccccagggctctccgtaagctggattttcaaatgcaacagtcggctgattcgggtcatttcttcttccaataaactttccaattggatatggaagctcgcgtcgcttgctcagaacagctaatcccgcaatcaagactccaaagactacaagaattacaacaatccagaaagcagaggaagatccctttgaagccgatcgtcgaggttcggaatccttaggaatcgcggaatacatcagtctgctgtgaccgagcgcgttggctgcgaggattccaacttcataatcttcggaaggatccacgtcgagttcgatctgaaataatagtttttcaattaattataatttacaaaaaaatactcacattctgctgaatagtcttcaacttgtgccaatcctcgtggtcatcgtgagcttttcgatagtagacagcaaaatatttatagtctttcgtaagtggataatcccattcaatgttgacttttccttctgatgccttgatacgaacattactgacttctgatggagcatgctcatgactcttcacagagcatgtcatgatagaaaccgcgtgttcggagcagtcaatatccggagagaagctatctccagagcacagtggaaggcatttcgatgtgacaccgctcgcgatgcaacaatcagaatgatcacgaatgtctgatgcgcacttgagaagtgagacagcgaaacgagtacaattttgatttttgattgaaagtgatgtacgtccaatgttgcaagcttgcagacaatctccagtgattccctcgtcttcgcagcattggagaatgagttttggattgactggaagtgtttcagtggagaaaatgacttcggacgatgcctcaactcgagaaccatcactagaagtgaccacacatttgtagaatccagcatcttcttgcttaactttgcggatctgaaaagttaatttttagtttatcaataaattttcaactacaaaacagttgagacagagctgaaaaggaattttctagctaacaagtgtttgataaaacaaaaggcagctgagatatacataattgataaaggtgagaaacggatcaggctcaatatttttgaagttttttcaatttttagaatttttccagagttcattttgaagagggtttgaaaacaattttaacttacatgccacttggccacgtatccagcttcagtcttcttcaggttcaagaatccccgtgatgccttctttccatccttctcgaatgaaatcttcggatcaagacctccacctcgatagatacactcaatttccacagactgatcatccaacacacggatcttgtccttcttcatcgtaactgacgcctttctctccaacaccagatgcttcatagcaacatgctgacgaccgtcggtgtccgatacagcacaggtagcagtgtccattgcctcgtctgcttcagtttccaggataacccacagtgcaccatgatcattttgcacgacatgtgatcctacagtcagatcgatgttgagatgcttcttgatgttcggcaaggagcaattaatggaaatcttttctccaggagaaaacactccatccttgtgatccggttcaatgacaattgttggctctggaagtcctggagagtctttttgagcaagaatagttattattgatgaactacgactggtacgattgtcttcctttgctgttacgtagacataatacagtgcatctttgcgaagatctctcatcacaacccaagtttgattggtcctcaacgttgtccatgtagagctttgctctgtatccaagtagtaaatggtgtactcaatcggtttggtcaccacttcagcgttacgacggactgagacagggtcccaggtgacgtttacgcgtggtcctgaattccatgagattctgagcttttctggagcaactggtcgatctccttcataaatctgcgccggcttggttgtgaaggtagcattccatgatggtggaccttctcccaaaaaattgatggcagtaacgcgaacagaataatccttgttaggctctagatcaatgaatcggaaaatgtctgcagaactgttctccgtcttaatcaaatttcctcctttttcaaataattgaacacggaaaacaatgatgttcgcttcgagatct | |
| Mapping_target | T04A11 | |||
| Origin | Species | Caenorhabditis elegans | ||
| Visible | Description | SL1 trans-splice leader acceptor site | ||
| SO_term | SO:0000706 | |||
| Defined_by | Defined_by_analysis | RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 | 1 | |
| Remark | Defined by RNASeq data (example read: SRR027190.4611170.+.SL1 - 28M) from RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX008139 with 1 reads | |||
| Method | SL1 |
