Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Feature: WBsf025008

expand all nodes | collapse all nodes | view schema

Name Class

WBsf025008SMapS_parentSequenceC04A2
Sequence_detailsFlanking_sequencesAATTCAAACAACACATGAGTAAAGAAATTAAATATAACTATTTTCAATTCAACACAGCTGAACTCCTCCA
Mapping_targetC04A2
Source_location190CHROMOSOME_II68478446847845
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionpolyA site
SO_termSO:0000553
Defined_byDefined_by_sequenceAF096618Inferred_automaticallyfind_missing_polya_feature_data.pl
make_missing_tsl_features.pl
early_embryo_bundle_of_reads_supporting_polyA_II_6847838_-_wb170
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_polyA_II_6847838_-_wb170
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_polyA_II_6847838_-_wb170
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_II_6847838_-_wb170
mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_polyA_II_6847838_-_wb170
elegans_PE_SS_GG7248|c2_g2_i1Inferred_automaticallymake_missing_tsl_features.pl
elegans_PE_SS_GG7248|c2_g2_i2Inferred_automaticallymake_missing_tsl_features.pl
Defined_by_paperWBPaper00037808
WBPaper00037948
Defined_by_analysisRNASeq_Hillier.early_embryo
RNASeq_Hillier.late_embryo
RNASeq_Hillier.L1_larva
RNASeq_Hillier.L3_larva
RNASeq_Hillier.L4_larva
RNASeq_Fire.all_stages_ssRNALigSeq
AssociationsAssociated_with_transcriptC04A2.3a.1
C04A2.3c.1
C04A2.3c.2
Remark[110125 gw3] This polyA_site feature was defined by the Bartel paper.
Bartel data confident_cleavagesite score: 548.0
MethodpolyA_site