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WormBase Tree Display for Feature: WBsf013952

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Name Class

WBsf013952SMapS_parentSequenceR09H10
Sequence_detailsFlanking_sequencesTATTTAACTGATAAAACGGCACATTTACAGATCATTGTCAGAAATGAACAAATTCTCGCT
Mapping_targetR09H10
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionSL1 trans-splice leader acceptor site
SO_termSO:0000706
Defined_byDefined_by_sequenceyk1455h03.3Curator_confirmedWBPerson1846
ce1080702aa0616Inferred_automaticallyace-TEC_RED.pl
yk869d09.3Inferred_automaticallyfind_tsl_overlap.pl
make_missing_tsl_features.pl
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_sl1_IV_10606989_10606990_+_wb170
dauer_daf-2_25dC_91hrs_post-L1_bundle_of_reads_supporting_sl1_IV_10606989_10606990_+_wb170
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_sl1_IV_10606989_10606990_+_wb170
dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_bundle_of_reads_supporting_sl1_IV_10606989_10606990_+_wb170
Adult_spe-9_23dC_8days_post-L4_molt_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
dauer_daf-2_25dC_91hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
dauer_entry_daf-2_25dC_48hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
early_embryo_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
embryo_him-8_20dC_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
male_mid-L4_25dC_30hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
mid-L4_20dC_36hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
Young_Adult_25dC_46hrs_post-L1_bundle_of_reads_supporting_SL1_IV_10606988_10606989_+_wb170
Defined_by_paperWBPaper00005692
WBPaper00037948
Defined_by_analysisTEC-RED
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018729
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018736
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX00187410
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0018754
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0048642
RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0048666
RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX00486813
RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX00486925
RNASeq.elegans.BA671.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX00813644
RNASeq.elegans.CB1370.WBls:0000052.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX00814017
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0081444
RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX0115693
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX01400629
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX01400714
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX01400855
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX01400951
RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX014010110
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA51225.SRX0267281
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA128465.SRX0282011
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA128465.SRX0282021
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03516211
RNASeq.elegans.N2.WBls:0000035.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03688116
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03688212
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0369676
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03696921
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0369707
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0371861
RNASeq.elegans.CB1489.WBls:0000003.Male.WBbt:0007833.PRJNA33023.SRX0371982
RNASeq.elegans.JK1107.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03720010
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX03728841
RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0474463
RNASeq.elegans.CB4689.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX04746923
RNASeq.elegans.CB1370.WBls:0000031.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0474701
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0476359
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX04765310
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0477876
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0492683
RNASeq.elegans.N2.WBls:0000038.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0492691
RNASeq.elegans.MT10430.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0497445
RNASeq.elegans.N2.WBls:0000038.Male.WBbt:0007833.PRJNA33023.SRX0497451
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0851111
RNASeq.elegans.N2.WBls:0000021.Hermaphrodite.WBbt:0005451.PRJNA33023.SRX0852863
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0924781
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX0999154
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX10398629
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1039886
RNASeq.elegans.N2.WBls:0000063.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1039895
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1454443
RNASeq.elegans.N2.WBls:0000024.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1454478
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1454863
RNASeq.elegans.N2.WBls:0000004.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX1456602
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX14566111
RNASeq.elegans.N2.WBls:0000027.Hermaphrodite.WBbt:0007833.PRJNA33023.SRX15160714
RNASeq.elegans.N2.WBls:0000035.Male.WBbt:0005062.PRJNA174814.SRX1856601
RNASeq.elegans.N2.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX1919472
AssociationsAssociated_with_geneWBGene00011181
Remark (55)
MethodSL1