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WormBase Tree Display for CDS: ZK337.1c

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Name Class

ZK337.1cSMapS_parentSequenceZK337
StructureSource_exons (17)
DB_infoDatabaseTrEMBLUniProtAccQ7YTU0
UniProtUniProtAccQ7YTU0
UniProt_GCRPUniProtAccQ7YTU0
AlphaFoldentryQ7YTU0
NCBI_proteinGI_numberGI:31873109
Protein_idCHROMOSOME_ICAD987281
DB_remarkTEP-1 protein; contains similarity to Pfam domains PF00207 (Alpha-2-macroglobulin family), PF01835 (MG2 domain), PF07677 (A-macroglobulin receptor binding domain), PF07678 (A-macroglobulin TED domain), PF07703 (Alpha-2-macroglobulin bait region domain), PF17791 (Macroglobulin domain MG3); contains similarity to Interpro domains IPR047565 (Alpha-macroglobulin-like, thiol-ester bond-forming region), IPR041555 (Macroglobulin domain MG3), IPR011625 (Alpha-2-macroglobulin, bait region domain), IPR001599 (Alpha-2-macroglobulin), IPR011626 (Alpha-macroglobulin-like, TED domain), IPR002890 (Macroglobulin domain), IPR036595 (Alpha-macroglobulin, receptor-binding domain superfamily), IPR013783 (Immunoglobulin-like fold), IPR009048 (Alpha-macroglobulin, receptor-binding), IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceNDBAU198464
Inferred_automaticallytranscript_builder
VisibleGeneWBGene00013969
Corresponding_transcriptZK337.1c.1
ZK337.1c.2
Corresponding_proteinCE34451
Corresponding_PCR_productcenix:73-a3
mv_ZK337.1a
mv_ZK337.1b
sjj_ZK337.1
Corresponding_oligo_set (18)
Matching_cDNA (26)
RNAi_resultWBRNAi00004926
WBRNAi00115767
WBRNAi00038259
WBRNAi00059345
Microarray_results (26)
RNASeq_FPKM (74)
Remark[030604 ar2] Added new isofom with modified intron in line with yk1103a05.5Curator_confirmedWBPerson1847
Methodcurated