WormBase Tree Display for CDS: ZK250.7
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ZK250.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK250 | |||
Structure | Source_exons | 1 | 107 | |||
212 | 510 | |||||
559 | 685 | |||||
730 | 995 | |||||
1474 | 1588 | |||||
1632 | 1989 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17303 | ||
UniProt | UniProtAcc | O17303 | ||||
UniProt_GCRP | UniProtAcc | O17303 | ||||
AlphaFold | entry | O17303 | ||||
NCBI_protein | GI_number | GI:351063417 | ||||
TREEFAM | TREEFAM_ID | TF322050 | ||||
Protein_id | CHROMOSOME_II | CCD71603 | 1 | |||
DB_remark | MATH-49 protein; contains similarity to Pfam domain PF00917 (MATH domain); contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH/TRAF domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00022690 | ||||
Corresponding_transcript | ZK250.7.1 | |||||
Corresponding_protein | CE15279 | |||||
Corresponding_PCR_product | cenix:236-c4 | |||||
mv_ZK250.7 | ||||||
sjj_ZK250.7 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA | L1_Nanopore_Li_205735 | Inferred_automatically | transcript_builder.pl | |||
FN898741 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00059301 | |||||
WBRNAi00021929 | ||||||
Microarray_results (16) | ||||||
Brief_identification | MATH domain-containing protein | Accession_evidence | UniProt | TR:O17303 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |