WormBase Tree Display for CDS: ZK1248.6
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| ZK1248.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK1248 | |||
| Structure | Source_exons | 1 | 384 | |||
| DB_info | Database | SwissProt | UniProtAcc | P53017 | ||
| UniProt | UniProtAcc | P53017 | ||||
| AlphaFold | entry | P53017 | ||||
| UniProt_GCRP | UniProtAcc | P53017 | ||||
| NCBI_protein | GI_number | GI:351064220 | ||||
| Protein_id | CHROMOSOME_II | CCD72508 | 1 | |||
| DB_remark | MSP-64 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold), IPR051155 (Nematode Major Sperm) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003457 | ||||
| Corresponding_transcript | ZK1248.6.1 | |||||
| Corresponding_protein | CE02806 | |||||
| Corresponding_PCR_product | cenix:13-c7 | |||||
| mv_ZK1248.6 | ||||||
| sjj_ZK1248.6 | ||||||
| Corresponding_oligo_set | 172734_x_at | |||||
| 172887_x_at | ||||||
| A_12_P115014 | ||||||
| Aff_ZK1248.6 | ||||||
| GPL13394_WBGene00003457 | ||||||
| GPL13914_ZK1248.6 | ||||||
| GPL8304_CE_WBGene00003457_A | ||||||
| GPL8673_ZK1248_6P00024 | ||||||
| GPL8673_ZK1248_6P00068 | ||||||
| GPL8673_ZK1248_6P00201 | ||||||
| Matching_cDNA (1067) | ||||||
| RNAi_result | WBRNAi00059189 | |||||
| WBRNAi00073428 | ||||||
| WBRNAi00059194 | ||||||
| WBRNAi00016632 | ||||||
| WBRNAi00049994 | ||||||
| WBRNAi00073427 | ||||||
| WBRNAi00038187 | ||||||
| WBRNAi00021849 | ||||||
| Microarray_results (11) | ||||||
| Brief_identification | Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 | Accession_evidence | UniProt | SP:P53017 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
