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WormBase Tree Display for CDS: ZK1098.5

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Name Class

ZK1098.5EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZK1098
StructureSource_exons142
91189
10091224
12691457
DB_infoDatabaseSwissProtUniProtAccP34605
UniProtUniProtAccP34605
UniProt_GCRPUniProtAccP34605
AlphaFoldentryP34605
NCBI_proteinGI_numberGI:3881484
TREEFAMTREEFAM_IDTF300091
Protein_idCHROMOSOME_IIICAA801331
DB_remarkTRPP-3 protein; contains similarity to Pfam domain PF04051 (Transport protein particle (TRAPP) component); contains similarity to Interpro domains IPR016721 (Bet3 family), IPR007194 (Transport protein particle (TRAPP) component), IPR024096 (NO signalling/Golgi transport ligand-binding domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00014222
Corresponding_transcriptZK1098.5.1
Corresponding_proteinCE00368
Corresponding_PCR_productTH:330d4
TH:341e2
WBPaper00038381:ZK1098_1_1
cenix:330-d4
cenix:334-f7
cenix:341-e2
mv_ZK1098.5
sjj_ZK1098.5
Corresponding_oligo_set (18)
Matching_cDNA (58)
RNAi_resultWBRNAi00059113
WBRNAi00059112
WBRNAi00059111
WBRNAi00082858
WBRNAi00085570
WBRNAi00038148
WBRNAi00002785
WBRNAi00002662
WBRNAi00061602
WBRNAi00021807
Microarray_results (19)
Brief_identificationTrafficking protein particle complex subunit 3 homologAccession_evidenceUniProtSP:P34605
RNASeq_FPKM (74)
Associated_featureWBsf012759
Methodcurated