WormBase Tree Display for CDS: ZK1098.5
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ZK1098.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK1098 | |||
Structure | Source_exons | 1 | 42 | |||
91 | 189 | |||||
1009 | 1224 | |||||
1269 | 1457 | |||||
DB_info | Database | SwissProt | UniProtAcc | P34605 | ||
UniProt | UniProtAcc | P34605 | ||||
UniProt_GCRP | UniProtAcc | P34605 | ||||
AlphaFold | entry | P34605 | ||||
NCBI_protein | GI_number | GI:3881484 | ||||
TREEFAM | TREEFAM_ID | TF300091 | ||||
Protein_id | CHROMOSOME_III | CAA80133 | 1 | |||
DB_remark | TRPP-3 protein; contains similarity to Pfam domain PF04051 (Transport protein particle (TRAPP) component); contains similarity to Interpro domains IPR016721 (Bet3 family), IPR007194 (Transport protein particle (TRAPP) component), IPR024096 (NO signalling/Golgi transport ligand-binding domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00014222 | ||||
Corresponding_transcript | ZK1098.5.1 | |||||
Corresponding_protein | CE00368 | |||||
Corresponding_PCR_product | TH:330d4 | |||||
TH:341e2 | ||||||
WBPaper00038381:ZK1098_1_1 | ||||||
cenix:330-d4 | ||||||
cenix:334-f7 | ||||||
cenix:341-e2 | ||||||
mv_ZK1098.5 | ||||||
sjj_ZK1098.5 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (58) | ||||||
RNAi_result | WBRNAi00059113 | |||||
WBRNAi00059112 | ||||||
WBRNAi00059111 | ||||||
WBRNAi00082858 | ||||||
WBRNAi00085570 | ||||||
WBRNAi00038148 | ||||||
WBRNAi00002785 | ||||||
WBRNAi00002662 | ||||||
WBRNAi00061602 | ||||||
WBRNAi00021807 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Trafficking protein particle complex subunit 3 homolog | Accession_evidence | UniProt | SP:P34605 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf012759 | |||||
Method | curated |